Evidence map›Paper›PMID 40809396›Full record

ArticleFrontiers in neuroscience2025

Equivariant spherical CNNs for accurate fiber orientation distribution estimation in neonatal diffusion MRI with reduced acquisition time.

Haykel Snoussi, Davood Karimi

Abstract read
In one paragraph

Article in Frontiers in neuroscience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

2 authors.

Haykel SnoussiDepartment of Radiology, Boston Children's Hospital and Harvard Medical School, Boston, MA, United States.
Davood KarimiDepartment of Radiology, Boston Children's Hospital and Harvard Medical School, Boston, MA, United States.

Funding

Enabling the Assessment of Fetal Brain Development and Degeneration with Machine LearningR01NS128281 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI Davood Karimi · 2023 to 2026
$1.8M
Accurate, reliable, and interpretable machine learning for assessment of neonatal and pediatric brain micro-structureR01HD110772 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Davood Karimi · 2023 to 2026
$1.5M
NICHD NIH HHS R01 HD110772NINDS NIH HHS R01 NS128281
6 · The paper itself

Abstract

Early and accurate assessment of brain microstructure using diffusion Magnetic Resonance Imaging (dMRI) is crucial for identifying neurodevelopmental disorders in neonates, but remains challenging due to low signal-to-noise ratio (SNR), motion artifacts, and ongoing myelination. In this study, we propose a rotationally equivariant Spherical Convolutional Neural Network (sCNN) framework tailored for neonatal dMRI. We predict the Fiber Orientation Distribution (FOD) from multi-shell dMRI signals acquired with a reduced set of gradient directions (30% of the full protocol), enabling faster and more cost-effective acquisitions. We train and evaluate the performance of our sCNN using real data from 43 neonatal dMRI datasets provided by the Developing Human Connectome Project (dHCP). Our results demonstrate that the sCNN significantly outperforms a Multi-Layer Perceptron (MLP) baseline across multiple quantitative metrics, including Mean Squared Error (MSE), Peak Signal-to-Noise Ratio (PSNR), Angular Correlation Coefficient (ACC), angular error, and peak match rate, indicating superior FOD estimation accuracy. More importantly, it yields FODs and tractography that are quantitatively comparable and qualitatively highly similar to those from a reliable Hybrid-CSD ground truth, despite using only 30% of the full acquisition data. These findings highlight sCNNs' potential for accurate and clinically efficient dMRI analysis, paving the way for improved diagnostic capabilities and characterization of early brain development with shorter scan times.

Indexed as

diffusion MRIfiber orientationgeometric deep learningneonatal brainspherical CNNstractography

Identifiers

PMID40809396
PMCPMC12343732

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.