Evidence map›Paper›PMID 40808554›Full record

ArticleAnimal bioscience2026

Transcriptome analysis of injured muscle identifies new candidate genes for satellite cell growth and myofiber formation during early muscle regeneration.

Zhuning Yuan, Xian Tong, Xianyao Luo, Liping Pan, Hoi-Ka Wu, Rong Xu, Ziyun Liang, Xunhe Huang, Delin Mo

Abstract read
In one paragraph

Article in Animal bioscience, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhuning YuanConservation and Utilization Laboratory of Mountain Characteristic Resources in Guangdong Province, School of Life Science, Jiaying University, Meizhou, China.
Xian TongConservation and Utilization Laboratory of Mountain Characteristic Resources in Guangdong Province, School of Life Science, Jiaying University, Meizhou, China.
Xianyao LuoState Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-Sen University, Guangzhou, China.
Liping PanState Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-Sen University, Guangzhou, China.
Hoi-Ka WuState Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-Sen University, Guangzhou, China.
Rong XuState Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-Sen University, Guangzhou, China.
Ziyun LiangState Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-Sen University, Guangzhou, China.
Xunhe HuangConservation and Utilization Laboratory of Mountain Characteristic Resources in Guangdong Province, School of Life Science, Jiaying University, Meizhou, China.
Delin MoState Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-Sen University, Guangzhou, China.

Funding

Earmarked Fund for China Agriculture Research System CARS-35Modern Agricultural Industrial Technology System lnnovation Team of Guangdong Province 2024CXTD22National Natural Science Foundation of China 32472858Selection and Breeding of New Local Pig Breeds and Promotion of Industrialization 2024-XPY-00-001
6 · The paper itself

Abstract

objectiveThe self-repair capacity of skeletal muscle makes satellite cell activity and myofiber formation interesting. The major molecular networks of satellite cell activity have been extensively studied. However, the mechanism by which micro-environmental factors regulate satellite cell activity for early muscle regeneration still remains poorly understood.

methodsControl and injured muscle samples were stained with H&E and immunofluorescent for embryonic myosin heavy chain (eMyHC) at 12, 24, 36, 48, 60, 72, and 84 hours post-injury. Additionally, muscle samples from three mice were immunofluorescent for eMyHC 96 hours post-injury. RNA sequencing and quantitative polymerase chain reaction were performed on 24 mice, including controls and samples at 12-, 24-, and 84-hour post-injury.

resultsSignificant upregulation of 516 immune-related and 177 hormone response-related genes was found in this study. Statistical analysis indicated that the number of differentially expressed genes (DEGs) associated with up- and down-regulated immune systemrelated DEGs was comparable to that of hormone response-related DEGs. The p53 signaling pathway was significantly enriched during early muscle regeneration. Analysis of crucial myogenic genes expression patterns yielded 326 and 320 candidate genes related to satellite cell growth and myofiber formation, respectively. Furthermore, interaction network analysis identified 41 immune factors, including S100a9, Csf3r, Cxcl3, Ppbp, Ccl3, Il-1rn, potentially regulating satellite cell activation, migration and proliferation. Likewise, 16 cell adhesion factors (Col1a2, Cdh2, Thbs2, etc.) may be involved in myofiber formation.

conclusionThis study utilized transcriptomic analysis to identify key candidate genes and biological processes involved in early muscle regeneration. The findings enhance our understanding of the molecular mechanisms underlying muscle repair and offer insights for future therapeutic strategies.

Indexed as

Cell AdhesionImmune SystemMyofiber FormationSatellite Cell GrowthTranscriptome

Identifiers

PMID40808554
PMCPMC12877386

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.