Evidence map›Paper›PMID 40804063›Full record

ArticleScientific data2025

Achieving Chromosome-Level Genome Assembly of Onychostoma macrolepis with PacBio Sequencing and Hi-C Technologies.

Lu Zhang, Ying Zhu, Lanzhu Zou, Min Cao, Chao Li

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lu ZhangSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China.
Ying ZhuSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China.
Lanzhu ZouInstitute of Fisheries, Taian Academy of Agricultural Sciences, Shandong, China.
Min CaoSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China.
Chao LiSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao, 266109, People's Republic of China. chaoli@qau.edu.cn.

Funding

Natural Science Foundation of Shandong Province (Shandong Provincial Natural Science Foundation) ZR2024QC027
6 · The paper itself

Abstract

Onychostoma macrolepis is an emerging commercial fish with high edible value. Due to overfishing and environmental pollution, the wild population of Onychostoma macrolepis is declining sharply. In this study, we successfully assembled a chromosome-level genome for Onychostoma macrolepis using a comprehensive approach that integrated Illumina sequencing, PacBio sequencing, and Hi-C technology. The genome spans is 944.02 MB, the contig N50 is 32.36 Mb, 99.15% of the assembled sequences are anchored on 25 chromosomes. A total of 26,294 protein-coding genes were predicted, among which 96.30% were functionally annotated. The high-quality genome data of O. macrolepis obtained in this study provide reliable resources for further research and restoration of wild germplasm resources.

Indexed as

ChromosomesFishesGenomeAnimalsHigh-Throughput Nucleotide SequencingSequence Analysis, DNA

Identifiers

PMID40804063
PMCPMC12350839

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.