Evidence map›Paper›PMID 40803325›Full record

ArticleMolecular cell2025

Distinct specificity and functions of PRC2 subcomplexes in human stem cells and cardiac differentiation.

Christian Much, Sandy M Rajkumar, Liming Chen, John M Cohen, Aravind R Gade, Geoffrey S Pitt, Yicheng Long

Abstract read
In one paragraph

Article in Molecular cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Christian MuchCardiovascular Research Institute, Weill Cornell Medicine, New York, NY 10021, USA; Department of Biochemistry, Weill Cornell Medicine, New York, NY 10021, USA.
Sandy M RajkumarCardiovascular Research Institute, Weill Cornell Medicine, New York, NY 10021, USA; Department of Biochemistry, Weill Cornell Medicine, New York, NY 10021, USA.
Liming ChenCardiovascular Research Institute, Weill Cornell Medicine, New York, NY 10021, USA; Department of Biochemistry, Weill Cornell Medicine, New York, NY 10021, USA.
John M CohenCardiovascular Research Institute, Weill Cornell Medicine, New York, NY 10021, USA; Department of Biochemistry, Weill Cornell Medicine, New York, NY 10021, USA.
Aravind R GadeCardiovascular Research Institute, Weill Cornell Medicine, New York, NY 10021, USA.
Geoffrey S PittCardiovascular Research Institute, Weill Cornell Medicine, New York, NY 10021, USA.
Yicheng LongCardiovascular Research Institute, Weill Cornell Medicine, New York, NY 10021, USA; Department of Biochemistry, Weill Cornell Medicine, New York, NY 10021, USA. Electronic address: yil4011@med.cornell.edu.

Funding

Phosphorylation-dependent regulation of calcium channels by macromolecular complexesR01HL146149 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Steven O Marx, Geoffrey S Pitt · 2019 to 2026
$5.0M
Investigating the role of CaV1.2 in aortic valve stenosisR01HL151190 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI PITT, GEOFFREY S · 2020 to 2023
$3.2M
Dynamic changes of the Nav1.5 interactome and contributions to heart failureR01HL160089 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI MARX, STEVEN O, PITT, GEOFFREY S · 2021 to 2024
$2.7M
Spatiotemporal regulation of epigenetic silencing by macromolecular interactionsR35GM155228 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI Yicheng Long · 2024 to 2026
$1.3M
Regulation of a chromatin modifier (Polycomb Repressive Complex 2) by nucleic acids interactionsR00GM132546 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI LONG, YICHENG · 2021 to 2023
$747k
NHLBI NIH HHS R01 HL146149NHLBI NIH HHS R01 HL151190NHLBI NIH HHS R01 HL160089NIGMS NIH HHS R00 GM132546NIGMS NIH HHS R35 GM155228
6 · The paper itself

Abstract

The dynamic regulation of epigenetic states relies on complex macromolecular interactions. PRC2, the methyltransferase complex depositing H3K27me3, interacts with distinct accessory proteins to form the mutually exclusive subcomplexes PHF1-PRC2.1, MTF2-PRC2.1, PHF19-PRC2.1, and PRC2.2. The functions of these subcomplexes are thought to be largely redundant. Here, we show that PRC2 subcomplexes have distinct roles in epigenetic repression of lineage-specific genes and stem cell differentiation. Using human pluripotent stem cells, we engineered a comprehensive set of separation-of-function mutants to dissect the roles of individual protein-protein and DNA-protein interactions. Our results show that PRC2.1 and PRC2.2 deposit H3K27me3 locus-specifically, resulting in opposing outcomes in cardiomyocyte differentiation. We find that MTF2 stimulates PRC2.1-mediated repression in stem cells and cardiac differentiation through its interaction with DNA and H3K36me3, while PHF19 antagonizes it. Together, these results reveal the importance and specificity of individual macromolecular interactions in Polycomb-mediated epigenetic repression in human stem cells and differentiation.

Indexed as

Cell DifferentiationMyocytes, CardiacPolycomb Repressive Complex 2DNA-Binding ProteinsEpigenesis, GeneticHistonesHumansProtein BindingTranscription FactorsDNA-Binding ProteinsHistonesPHF19 protein, humanPolycomb Repressive Complex 2Transcription Factorscardiac differentiationepigeneticsH3K27me3human pluripotent stem cellsPolycombPRC2

Identifiers

PMID40803325
PMCPMC12352605

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.