Evidence map›Paper›PMID 40802571›Full record

ArticleLangmuir : the ACS journal of surfaces and colloids2025

Spatial Molecular Heterogeneity on Biofunctionalized Particles Quantified by Three-Dimensional Single-Molecule DNA-PAINT.

Wei Shan Tan, Arthur M de Jong, Menno W J Prins

Abstract read
In one paragraph

Article in Langmuir : the ACS journal of surfaces and colloids, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Wei Shan TanDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven 5612 AZ, The Netherlands.ORCID 0000-0001-9833-5033
Arthur M de JongInstitute for Complex Molecular Systems (ICMS), Eindhoven University of Technology, Eindhoven 5612 AZ, The Netherlands.ORCID 0000-0001-6019-7333
Menno W J PrinsDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven 5612 AZ, The Netherlands.ORCID 0000-0002-9788-7298

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantifying and controlling the spatial molecular heterogeneity on biofunctionalized particles is essential for understanding and improving their functionality in bioscience applications. Here, we describe an analysis framework based on single-molecule localization microscopy that can quantitatively assess the spatial molecular properties of affinity molecules conjugated to particles. We performed 3D DNA-PAINT imaging on biofunctionalized particles and established analysis methods to correlate single-molecule data to the particle outer surfaces, count the number of conjugated molecules, and quantify the spatial distributions of the conjugated molecules. We show that imaging data combined with simulation-based molecular counting gives access to high densities of conjugated molecules and enables quantification of their spatial distributions. The analysis is exemplified for particles with a diameter of 1 μm functionalized with single-stranded DNA molecules via two bioconjugation methods, namely, streptavidin-biotin coupling and PLL-

Indexed as

DNADNA, Single-StrandedSingle Molecule ImagingBiotinClick ChemistryParticle SizePolyethylene GlycolsStreptavidinBiotinDNADNA, Single-StrandedPolyethylene GlycolsStreptavidin

Identifiers

PMID40802571
PMCPMC12392723

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.