Evidence map›Paper›PMID 40800373›Full record

ArticleImaging neuroscience (Cambridge, Mass.)2024

Whole-brain responses to visual and auditory stimuli in anesthetized and minimally restrained awake mice using quiet zero echo time fMRI.

Lenka Dvořáková, Petteri Stenroos, Raimo A Salo, Ekaterina Paasonen, Heikki Tanila, Shalom Michaeli, Silvia Mangia, Tamara Zehnder, Thomas Mueggler, Basil Künnecke and 2 more

Abstract read
In one paragraph

Article in Imaging neuroscience (Cambridge, Mass.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Biphasic acclimation for simultaneous wide-field fluorescent CaImaging neuroscience (Cambridge, Mass.) · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Correlation of zero echo time functional MRI with neuronal activity in rats.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2025
    Article
  11. Simultaneous zero echo time fMRI of rat brain and spinal cord.bioRxiv : the preprint server for biology · 2025
    Article
  12. Review
  13. Charting the path in rodent functional neuroimaging.Imaging neuroscience (Cambridge, Mass.) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Lenka DvořákováA.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Petteri StenroosA.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Raimo A SaloA.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Ekaterina PaasonenA.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Heikki TanilaA.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Shalom MichaeliCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, United States.
Silvia MangiaCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, United States.
Tamara ZehnderNeuroscience and Rare Diseases, Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland.
Thomas MuegglerNeuroscience and Rare Diseases, Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland.
Basil KünneckeNeuroscience and Rare Diseases, Roche Pharma Research and Early Development, Roche Innovation Center Basel, Basel, Switzerland.
Jaakko PaasonenA.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Olli GröhnA.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.

Funding

TRD4 - Ultrahigh Field Engineering and SafetyP41EB027061 · NIBIB · UNIVERSITY OF MINNESOTA · PI Mehmet Akcakaya · 2019 to 2026
$11.7M
Next-Generation fMRI with MB-SWIFT: Insights into the Origins of ContrastR01MH127548 · NIMH · UNIVERSITY OF MINNESOTA · PI MANGIA, SILVIA, MICHAELI, SHALOM · 2021 to 2023
$1.6M
NIBIB NIH HHS P41 EB027061NIMH NIH HHS R01 MH127548
6 · The paper itself

Abstract

Functional MRI (fMRI) is a flexible tool for sensory perception studies in animal models. However, animal fMRI studies are generally performed under anesthesia. Unfortunately, anesthesia affects brain function and sensory processing, complicating the interpretation of the findings. Since there is a growing need for fMRI protocols applicable for awake animals, we optimized a zero echo time Multi-Band Sweep Imaging with a Fourier Transformation (MB-SWIFT) fMRI approach for imaging awake mice. We implemented a 14-day habituation protocol that resulted in merely moderate motion of the mice while being head-fixed with the animals' body and limbs being free to move. The sensory responsiveness between different states of consciousness was compared by imaging mice with visual and auditory stimulation schemes in the awake state and under ketamine-xylazine anesthesia. In awake mice, we observed a robust whole-brain activation of the ascending auditory and visual pathways, as well as higher sensory processing areas. Under ketamine-xylazine anesthesia, auditory responses were suppressed, and the temporal shapes of fMRI responses were different from those obtained in awake mice. Our results suggest that the quiet and motion-tolerant zero echo time MB-SWIFT approach allows complex behavioral fMRI designs in the awake state that promise to improve our understanding of the underlying mechanisms of perception.

Indexed as

auditory pathwayawake mouse fMRIketamine–xylazine anesthesiasensory-evoked fMRIvisual pathwayzero echo time fMRI

Identifiers

PMID40800373
PMCPMC12330383

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.