Evidence map›Paper›PMID 40796731›Full record

ArticleNature communications2025

Structure guided functional analysis of the S. cerevisiae Mre11 complex.

Marcel Hohl, You Yu, Vitaly Kuryavyi, Dinshaw J Patel, John Petrini

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Rap1-mediated steric hindrance protects telomeres from MRX sensing.Nature structural & molecular biology · 2026
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Marcel Hohl *Molecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
You Yu *Structural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Vitaly KuryavyiStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA. kuryavyv@mskcc.org.ORCID http://orcid.org/0000-0003-3938-6652
Dinshaw J PatelStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA. pateld@mskcc.org.ORCID http://orcid.org/0000-0002-9779-7778
John PetriniMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA. petrinij@mskcc.org.ORCID http://orcid.org/0000-0001-5102-5679

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
DNA Damage & DNA Replication: a Complex RelationshipR35GM136278 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI John HJ Petrini · 2020 to 2026
$5.5M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R35 GM136278U.S. Department of Health & Human Services | National Institutes of Health (NIH) R35 GM136278-04
6 · The paper itself

Abstract

The Mre11 complex comprises Mre11, Rad50 and Nbs1 (Xrs2 in S. cerevisiae). The core components, Mre11 and Rad50 are highly conserved, with readily identifiable orthologs in all clades of life, whereas Nbs1/Xrs2 are present only in eukaryotes. In eukaryotes, the complex is integral to the DNA damage response, acting in DNA double strand break (DSB) detection and repair, and the activation of DNA damage signaling. We present here a 3.2 Å cryo-EM structure of the S. cerevisiae Mre11-Rad50 complex with bound dsDNA. The structure provided a foundation for detailed mutational analyses regarding homo and heterotypic protein interfaces, as well as DNA binding properties of Rad50. We define several conserved residues in Rad50 and Mre11 that are critical to complex assembly as well as for DNA binding. In addition, the data reveal that the Rad50 coiled coil domain influences ATP hydrolysis over long distances.

Indexed as

DNA-Binding ProteinsEndodeoxyribonucleasesExodeoxyribonucleasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphateCryoelectron MicroscopyDNA Breaks, Double-StrandedDNA, FungalDNA RepairModels, MolecularProtein BindingAdenosine TriphosphateDNA-Binding ProteinsDNA, FungalEndodeoxyribonucleasesExodeoxyribonucleasesMRE11 protein, S cerevisiaeRAD50 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsXRS2 protein, S cerevisiae

Identifiers

PMID40796731
PMCPMC12343972

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.