Evidence map›Paper›PMID 40791510›Full record

ArticlebioRxiv : the preprint server for biology2025

A versatile enzymatic pathway for modification of peptide C-termini.

Shravan R Dommaraju, Sanath K Kandy, Hengqian Ren, Dominic P Luciano, Shogo Fujiki, David Sarlah, Huimin Zhao, Jonathan R Chekan, Douglas A Mitchell

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Shravan R DommarajuDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.ORCID 0000-0002-0565-1748
Sanath K KandyDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, NC 27402, USA.ORCID 0000-0002-0490-4045
Hengqian RenCarl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.ORCID 0000-0001-7045-6036
Dominic P LucianoDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801.ORCID 0009-0002-5257-5589
Shogo FujikiDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801.
David SarlahDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801.ORCID 0000-0002-8736-8953
Huimin ZhaoDepartment of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801.
Jonathan R ChekanDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, NC 27402, USA.ORCID 0000-0003-4651-0594
Douglas A MitchellDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.ORCID 0000-0002-9564-0953

Funding

A Scalable Platform to Discover Antimicrobials of Ribosomal OriginR01AI144967 · NIAID · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI Douglas Alan Mitchell, WILFRED A. VAN DER DONK · 2019 to 2026
$6.0M
Enzyme Chemistry and Biological Function of RiPP-like Modifications.R01GM097142 · NIGMS · VANDERBILT UNIVERSITY · PI MITCHELL, DOUGLAS ALAN · 2012 to 2024
$4.1M
Bioinformatic Guided Discovery and Characterization of New RiPP Natural ProductsR35GM147439 · NIGMS · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI Jonathan Rodi Chekan · 2022 to 2026
$1.8M
NIAID NIH HHS R01 AI144967NIGMS NIH HHS R01 GM097142NIGMS NIH HHS R35 GM147439
6 · The paper itself

Abstract

Advances in bioinformatics have enabled the discovery of unique enzymatic reactions, particularly for ribosomally synthesized and post-translationally modified peptides (RiPPs). The recently discovered daptides, peptides with their C-terminus replaced by an amine, represent one such case, but the diversity, requirements, and engineering potential of daptide biosynthesis remain to be established. Using the daptide biosynthetic gene clusters from

Identifiers

PMID40791510
PMCPMC12338566

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.