Evidence map›Paper›PMID 40790242›Full record

ArticleBiology of sex differences2025

Sex-dependent epigenetic disruption of YY1 binding by prenatal BPA exposure downregulates Matr3 and alters Agap1 splicing in the offspring hippocampus.

Pattanachat Lertpeerapan, Songphon Kanlayaprasit, Surangrat Thongkorn, Kasidit Kasitipradit, Pawinee Panjabud, Kwanjira Songsritaya, Thanawin Jantheang, Masanobu Morita, Takaaki Akaike, Valerie W Hu and 3 more

Abstract read
In one paragraph

Article in Biology of sex differences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Pattanachat LertpeerapanThe Ph.D. program in Clinical Biochemistry and Molecular Medicine, Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.
Songphon KanlayaprasitChulalongkorn Autism Research and Innovation Center of Excellence (ChulaACE), Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.
Surangrat ThongkornDepartment of Biotechnology and Biomedicine (DTU Bioengineering), Technical University of Denmark, 2800, Kgs. Lyngby, Denmark.
Kasidit KasitipraditThe Ph.D. program in Clinical Biochemistry and Molecular Medicine, Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.
Pawinee PanjabudThe Ph.D. program in Clinical Biochemistry and Molecular Medicine, Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.
Kwanjira SongsritayaThe M.Sc. Program in Clinical Biochemistry and Molecular Medicine, Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.
Thanawin JantheangThe Ph.D. program in Clinical Biochemistry and Molecular Medicine, Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.
Masanobu MoritaDepartment of Environmental Medicine and Molecular Toxicology, Tohoku University Graduate School of Medicine, Miyagi, 980-8575, Japan.
Takaaki AkaikeDepartment of Environmental Medicine and Molecular Toxicology, Tohoku University Graduate School of Medicine, Miyagi, 980-8575, Japan.
Valerie W HuDepartment of Biochemistry and Molecular Medicine, School of Medicine and Health Sciences, The George Washington University, Washington, DC, 20037, USA.
Depicha JindatipDepartment of Anatomy, Faculty of Medicine, Chulalongkorn University, Bangkok, 10330, Thailand.
Thanit SaeliwChulalongkorn Autism Research and Innovation Center of Excellence (ChulaACE), Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand.
Tewarit SarachanaChulalongkorn Autism Research and Innovation Center of Excellence (ChulaACE), Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok, 10330, Thailand. tewarit.sa@chula.ac.th.

Funding

Chulalongkorn University Laboratory Animal Center (CULAC) Grant Animal Use Protocol No. 2273007Ratchadapisek Somphot Fund for Supporting Research Unit and Center of Excellence, Chulalongkorn University CE68_080_3700_001Royal Golden Jubilee Ph.D. Programme Scholarships N41A650065The 90th Anniversary Chulalongkorn University Fund (Ratchadaphiseksomphot Endowment Fund) GCUGR1125632109D-109The 90th Anniversary Chulalongkorn University Fund (Ratchadaphiseksomphot Endowment Fund) GCUGR1125651060D-060The 90th Anniversary Chulalongkorn University Fund (Ratchadaphiseksomphot Endowment Fund) GCUGR1125651062D -62The 90th Anniversary Chulalongkorn University Fund (Ratchadaphiseksomphot Endowment Fund) GCUR1125662067Dthe NSRF via the Program Management Unit for Human Resources & Institutional Development, Research and Innovation B36G660008the Thailand Science Research and Innovation Fund Chulalongkorn University HEAF67370092
6 · The paper itself

Abstract

backgroundAutism spectrum disorder (ASD) is a neurodevelopmental condition characterized by impairments in communication, social interaction, and behavior. Its etiology involves a combination of genetic and environmental factors, and it is more prevalent in males. Bisphenol A (BPA), an endocrine-disrupting chemical commonly found in plastics, has been linked to an increased risk of ASD. However, the molecular mechanisms by which BPA affects gene regulation remain poorly understood.

methodsIn this study, hippocampal tissues were collected from rat offspring prenatally exposed to BPA at a dose of 5,000 µg/kg of maternal body weight, equivalent to the NOAEL. RNA sequencing was performed to identify genes exhibiting differential alternative splicing. ASD-related alternatively spliced genes were selected for validation using high-resolution melting (HRM) analysis. Ingenuity Pathway Analysis (IPA) was used to predict associated biological functions, diseases, and molecular interaction networks. Additionally, BPA-responsive transcription factors, RNA-binding proteins, splicing regulators, and differentially expressed genes were analyzed to identify upstream regulatory mechanisms. Gene expression was validated by qRT-PCR, and transcription factor binding was confirmed via chromatin immunoprecipitation-qPCR (ChIP-qPCR).

resultsRNA-seq analysis revealed that prenatal BPA exposure altered the alternative splicing of ASD-related genes in the hippocampus, including Agap1, Ap2b1, and Kifap3. Gene ontology and pathway analyses indicated that differentially spliced genes were involved in mRNA splicing processes in males and neuronal functions in females, patterns that align with ASD-related phenotypes. ChIP-qPCR revealed sex-specific differences in YY1 transcription factor binding at the Matr3 promoter, with males showing reduced binding, leading to downregulation of Matr3 expression. Notably, Agap1, a target of MATR3, exhibited increased alternative splicing specifically in the hippocampus of male offspring.

conclusionsThis study provides the first evidence that prenatal BPA exposure disrupts the alternative splicing and transcriptional regulation of ASD-related genes in offspring’s hippocampus in a sex-specific manner. These disruptions, particularly the YY1-mediated regulation of Matr3 and downstream effects on Agap1 splicing in males, offer new insights into the molecular mechanisms by which BPA may contribute to ASD pathogenesis.

Indexed as

Benzhydryl CompoundsEndocrine DisruptorsEpigenesis, GeneticHippocampusPhenolsPoly(A)-Binding ProteinsPrenatal Exposure Delayed EffectsRNA-Binding ProteinsSex CharacteristicsYY1 Transcription FactorAlternative SplicingAnimalsBisphenol A CompoundsDown-RegulationFemaleMaleBenzhydryl Compoundsbisphenol ABisphenol A CompoundsEndocrine DisruptorsPhenolsPoly(A)-Binding ProteinsRNA-Binding ProteinsYy1 protein, ratYY1 Transcription FactorAgap1Alternative splicingAutism spectrum disorderBisphenol AInteractomeMatr3RNA-binding proteinSex differenceTranscription factor YY1Transcriptome

Identifiers

PMID40790242
PMCPMC12337383

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.