Evidence map›Paper›PMID 40788923›Full record

ArticlePLoS genetics2025

An l-fucose-responsive transcription factor cross-regulates the expression of a diverse array of carbohydrate-active enzymes in Trichoderma reesei.

Qinqin Zhao, Liwei Gao, Nuo Xu, Xiuting Zhang, Yuqi Qin, Yinbo Qu, Guodong Liu

Abstract read
In one paragraph

Article in PLoS genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Mining Genetically Encoded Biosensors from Filamentous Fungi.Journal of fungi (Basel, Switzerland) · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Qinqin ZhaoState Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.
Liwei GaoTobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, Shandong, China.
Nuo XuState Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.
Xiuting ZhangState Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.
Yuqi QinState Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.
Yinbo QuState Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.
Guodong LiuState Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.ORCID https://orcid.org/0000-0002-8645-3531

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

l-Fucose is a universal capping component of biomolecules found throughout all domains of life. Although fungi are renowned for their role in biomass recycling, the mechanisms by which they process l-fucose remain largely unknown. In this study, we elucidate a l-fucose-responsive system in Trichoderma reesei, a model fungus for plant cell wall degradation. Central to this system is the transcription factor FUR1, which is indispensable for growth on l-fucose. FUR1 orchestrates the expression of l-fucose catabolic enzymes, including an l-fucose dehydrogenase that exhibits distant homology to counterparts in bacteria and mammals. Through RNA sequencing and biochemical assays, we demonstrate that FUR1 also governs the enzymatic liberation of l-fucose by upregulating extracellular α-l-fucosidases. Intriguingly, FUR1 mediates l-fucose-triggered expression of a broad spectrum of enzymes that target diverse glycosidic bonds (e.g., β-glucuronidic, α-galactosidic, and β-xylosidic linkages) within complex carbohydrates. Expression of a constitutively active FUR1 mutant unlocked the production of otherwise silent glycosidases, substantially boosting the hydrolytic capacity of the fungal secretome on orange peel. These findings offer the first molecular insight into l-fucose sensing and metabolism in fungi, and advance our understanding of the fungal regulatory network for coordinated expression of biomass-degrading enzymes.

Indexed as

FucoseFungal ProteinsHypocrealesTranscription FactorsCarbohydrate MetabolismGene Expression Regulation, FungalFucoseFungal ProteinsTranscription Factors

Identifiers

PMID40788923
PMCPMC12370193

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.