Evidence map›Paper›PMID 40783839›Full record

ArticleJournal of chemical information and modeling2025

Advancing Aqueous Solubility Prediction: A Machine Learning Approach for Organic Compounds Using a Curated Data Set.

Mushtaq Ali, Sylvia Vanderheiden, Christoph W Grathwol, Konrad Krämer, Pascal Friederich, Nicole Jung, Stefan Bräse

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mushtaq AliInstitute of Biological and Chemical Systems (IBCS), Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 76131, Germany.ORCID 0009-0007-6808-5783
Sylvia VanderheidenInstitute of Biological and Chemical Systems (IBCS), Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 76131, Germany.ORCID 0000-0003-4485-8159
Christoph W GrathwolInstitute of Biological and Chemical Systems (IBCS), Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 76131, Germany.ORCID 0000-0003-0232-3279
Konrad KrämerInstitute of Biological and Chemical Systems (IBCS), Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 76131, Germany.
Pascal FriederichInstitute of Theoretical Informatics, Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 76131, Germany.ORCID 0000-0003-4465-1465
Nicole JungInstitute of Biological and Chemical Systems (IBCS), Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 76131, Germany.ORCID 0000-0001-9513-2468
Stefan BräseInstitute of Biological and Chemical Systems (IBCS), Karlsruhe Institute of Technology, Kaiserstraße 12, Karlsruhe 76131, Germany.ORCID 0000-0003-4845-3191

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aqueous solubility is one key property of a chemical compound that determines its possible use in different applications, from drug development to materials sciences. In this work, we present a model for the prediction of aqueous solubility that leverages a curated data set merged from four distinct sources. This data set encompasses a diverse range of organic compounds, providing a robust foundation for our investigation of solubility prediction. Our approach involves employing a variety of machine learning and deep learning models that combine an extensive array of chemical descriptors, fingerprints, and functional groups. This methodology is designed to address the complexities of solubility prediction and is tailored to achieve high accuracy and generalization. We tested the finalized model on a diverse data set of 1282 unique organic compounds from the Huuskonen data set. The results of our analysis demonstrate the success of our model, which, given an

Indexed as

Machine LearningOrganic ChemicalsWaterSolubilityOrganic ChemicalsWater

Identifiers

PMID40783839
PMCPMC12382903

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.