Evidence map›Paper›PMID 40781591›Full record

ArticleBMC plant biology2025

Mutation of PUB21 in tomato leads to reduced susceptibility to necrotrophic fungi.

Miguel Ramírez Gaona, Ageeth van Tuinen, Danny Schipper, Ángeles Ramos Peregrina, Richard G F Visser, Jan A L van Kan, Yuling Bai, Anne-Marie A Wolters

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Miguel Ramírez GaonaPlant Breeding, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.ORCID http://orcid.org/0000-0003-4313-3391
Ageeth van TuinenPlant Breeding, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.
Danny SchipperPlant Breeding, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.
Ángeles Ramos PeregrinaPlant Breeding, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.ORCID http://orcid.org/0009-0004-4569-8323
Richard G F VisserPlant Breeding, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.ORCID http://orcid.org/0000-0002-0213-4016
Jan A L van KanLaboratory of Phytopathology, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.ORCID http://orcid.org/0000-0003-3563-1550
Yuling BaiPlant Breeding, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.ORCID http://orcid.org/0000-0002-9382-6551
Anne-Marie A WoltersPlant Breeding, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands. anne-marie.wolters@wur.nl.ORCID http://orcid.org/0000-0001-8537-5132

Funding

Foundation Topconsortium voor Kennis en Innovatie (TKI) EZ-2012-07 and TU-18015
6 · The paper itself

Abstract

backgroundCultivated tomato is susceptible to necrotrophic pathogens Botrytis cinerea and Alternaria solani. No dominant resistance against these pathogens has been reported in wild relatives of tomato.

resultsThrough screening of a tomato Micro-Tom EMS population we identified a mutant that showed decreased susceptibility to both necrotrophic fungi. Previously, we reported a mutation in the tomato PUB17 gene as the cause of reduced susceptibility in this mutant. Surprisingly, M4 progeny of one M3 plant homozygous for the pub17 mutation showed segregation with some plants displaying an even higher level of resistance than the pub17 mutant. This highly resistant progeny was shown to contain a mutation in tomato PUB21 in addition to the mutation in PUB17. The role of PUB21 as a susceptibility factor for both necrotrophic fungi was confirmed in RNAi-silenced and CRISPR-mutated transformants.

conclusionsIn this study we identified a new PUB gene, SlPUB21, involved in susceptibility of tomato to necrotrophic pathogens. We showed that mutation of this gene resulted in increased resistance against these pathogens.

Indexed as

AlternariaBotrytisPlant DiseasesPlant ProteinsSolanum lycopersicumDisease ResistanceGenes, PlantMutationPlant ProteinsAlternaria SolaniBotrytis cinereaEMSPUB21Susceptibility gene (S-gene)Tomato

Identifiers

PMID40781591
PMCPMC12333220

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.