Evidence map›Paper›PMID 40780209›Full record

ArticleDevelopmental cell2025

Nuclear lamina phase separation orchestrates stress-induced transcriptional responses in plants.

Yu Tang, Xiao Liu, Yiling Fang, Enrico Calvanese, Yeram Hong, Yangnan Gu

Abstract read
In one paragraph

Article in Developmental cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. A multiomics atlas of theScience advances · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yu TangDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA 94720, USA; State Key Laboratory of Wheat Improvement, Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agricultural Sciences in Weifang, Shandong 261325, China. Electronic address: yu.tang@pku-iaas.edu.cn.
Xiao LiuState Key Laboratory of Wheat Improvement, Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agricultural Sciences in Weifang, Shandong 261325, China.
Yiling FangDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Enrico CalvaneseDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Yeram HongDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Yangnan GuDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA 94720, USA. Electronic address: guyangnan@berkeley.edu.

Funding

Understanding the role of the nuclear pore complex in undifferentiated cell proliferation and gene gatingR35GM154623 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Yangnan Gu · 2024 to 2026
$1.2M
NIGMS NIH HHS R35 GM154623
6 · The paper itself

Abstract

The nuclear lamina (NL), a perinuclear protein meshwork formed by nucleoskeleton and inner nuclear membrane (INM) proteins, is crucial for chromatin organization at the nuclear periphery and gene expression regulation in eukaryotic cells. However, NL-dependent transcriptional regulation remains poorly understood in plants due to the absence of most canonical NL proteins found in animals. Here, we report that the plant INM protein PLANT NUCLEAR ENVELOPE TRANSMEMBRANE 2 (PNET2) interacts with membrane-bound NAC (NAM, ATAF1/2, and CUC2) transcription factors, NTLs, via intrinsic disorder regions and promotes liquid-liquid phase separation within the NL. This compartmentalization effectively sequesters NTLs and restricts their transcriptional activity. In the absence of PNET2, NTLs become deregulated, triggering spontaneous and broad-spectrum stress responses. Importantly, we found that stress stimuli, such as heat shock, disrupt PNET2-NTL phase separation, releasing NTLs for target gene binding and transcriptional activation. These findings demonstrate a phase separation-based regulatory mechanism within the NL that controls membrane-bound transcription factor activity in response to environmental cues.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantNuclear LaminaStress, PhysiologicalTranscription, GeneticHeat-Shock ResponseMembrane ProteinsPhase SeparationTranscription FactorsArabidopsis ProteinsMembrane ProteinsTranscription Factorsgene expression regulationsmembrane-bound transcription factorsNTLnuclear laminanuclear membranenucleoskeletonphase separationplant cellsPNET2stress responses

Identifiers

PMID40780209
PMCPMC12338065

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.