Evidence map›Paper›PMID 40779278›Full record

ArticlePlanta2025

Gene expression analysis and halting of ethylene receptors signaling pinpoint ethylene as a positive regulator of direct somatic embryogenesis in Coffea arabica.

Natalia Gomes Vieira, Cesar Augusto Nascimento, Ilse Fernanda Ferrari, Mariana Silva Sartorello, Juliana Costa de Rezende, Daniela de Argollo Marques, Angelo Pedro Jacomino, Julieta Andrea Silva de Almeida, Jorge Maurício Costa Mondego

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Article in Planta, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Natalia Gomes Vieira *Laboratório de Biotecnologia e Interação Planta-Microrganismos (LABIPLAM), Centro de Recursos Genéticos Vegetais, Instituto Agronômico (IAC), Campinas, SP, Brasil.
Cesar Augusto Nascimento *Laboratório de Biotecnologia e Interação Planta-Microrganismos (LABIPLAM), Centro de Recursos Genéticos Vegetais, Instituto Agronômico (IAC), Campinas, SP, Brasil.
Ilse Fernanda FerrariLaboratório de Biotecnologia e Interação Planta-Microrganismos (LABIPLAM), Centro de Recursos Genéticos Vegetais, Instituto Agronômico (IAC), Campinas, SP, Brasil.
Mariana Silva SartorelloDepartamento de Produção Vegetal, ESALQ, Universidade de São Paulo, Piracicaba, SP, Brasil.
Juliana Costa de RezendeEmpresa de Pesquisa Agropecuária de Minas Gerais, EPAMIG Sul, Lavras, MG, Brazil.
Daniela de Argollo MarquesLaboratório de Biotecnologia e Interação Planta-Microrganismos (LABIPLAM), Centro de Recursos Genéticos Vegetais, Instituto Agronômico (IAC), Campinas, SP, Brasil.
Angelo Pedro JacominoDepartamento de Produção Vegetal, ESALQ, Universidade de São Paulo, Piracicaba, SP, Brasil.
Julieta Andrea Silva de AlmeidaCentro de Pesquisa e Desenvolvimento do Café Alcides Carvalho, Instituto Agronomico (IAC), Campinas, SP, Brasil.
Jorge Maurício Costa MondegoLaboratório de Biotecnologia e Interação Planta-Microrganismos (LABIPLAM), Centro de Recursos Genéticos Vegetais, Instituto Agronômico (IAC), Campinas, SP, Brasil. jorge.mondego@sp.gov.br.

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 381079/2022-8Conselho Nacional de Desenvolvimento Científico e Tecnológico 381084/2022-1Conselho Nacional de Desenvolvimento Científico e Tecnológico 385035/2023-3Conselho Nacional de Desenvolvimento Científico e Tecnológico 385626/2023-1Conselho Nacional de Desenvolvimento Científico e Tecnológico 465580/2014-9FAPESP 2013/17544-3
6 · The paper itself

Abstract

MAIN

conclusionEthylene acts as a positive regulator of Coffea arabica direct somatic embryogenesis when using leaves as explants. Ethylene is a gaseous growth regulator synthesized by plants, acting on senescence and biotic and abiotic stress responses. It has also been associated with fruit ripening, carotenoid and anthocyanin accumulation, and embryogenesis. However, the role of ethylene during zygotic and somatic embryogenesis is not entirely elucidated. In this work, we aimed to investigate the role of early ethylene signaling during embryogenesis in Coffea arabica, one of the most important commercial plants. Thorough morphological and gene expression analyses were performed during fruit development and direct somatic embryogenesis (DSE). In addition, tissue culture explants in sealed flasks were used to evaluate the ethylene production during DSE. The genes encoding the ethylene receptors Ethylene Receptor 1 (ETR1), Ethylene Receptor 2 (ETR2), Ethylene Response Sensor 1 (ERS1), and Ethylene Insensitive 4 (EIN4) and one gene encoding the enzyme responsible for ethylene synthesis 1-aminocyclopropane-1-carboxylic oxidase (ACO) are expressed during direct somatic embryogenesis (DSE) and in zygotic embryogenesis during fruit development, each having a different gene expression profile. The addition of silver nitrate, an inhibitor of ethylene signaling, to tissue culture medium, positively influenced on pro-embryogenic mass formation but harmed embryo formation, suggesting that ethylene is involved in DSE in C. arabica. In addition, we confirmed ethylene production by leaf explants during DSE. Overall, we suggest that ethylene is an important positive regulator of direct somatic embryogenesis in C. arabica. We discuss the participation of ethylene perception in embryonic development and its connection to cytokinin and explant wounding.

Indexed as

CoffeaEthylenesPlant Growth RegulatorsPlant ProteinsReceptors, Cell SurfaceFruitGene Expression Regulation, PlantPlant LeavesPlant Somatic Embryogenesis TechniquesSignal Transductionethyleneethylene receptors, plantEthylenesPlant Growth RegulatorsPlant ProteinsReceptors, Cell SurfaceCoffea arabicaEthylene receptorsEthylene signalingSomatic embryogenesisZygotic embryogenesis

Identifiers

PMID40779278

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.