Evidence map›Paper›PMID 40778756›Full record

ArticlemSphere2025

Effect of temperature on microbial communities in bentonite for use in engineered barrier systems.

Rachel C Beaver, Cailyn M Perry, Chang Seok Kim, Josh D Neufeld

Abstract read
In one paragraph

Article in mSphere, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Rachel C BeaverDepartment of Biology, University of Waterloo, Waterloo, Ontario, Canada.ORCID 0000-0001-7495-2352
Cailyn M PerryDepartment of Biology, University of Waterloo, Waterloo, Ontario, Canada.
Chang Seok KimNuclear Waste Management Organization (NWMO), Toronto, Ontario, Canada.
Josh D NeufeldDepartment of Biology, University of Waterloo, Waterloo, Ontario, Canada.ORCID 0000-0002-8722-8571

Funding

Natural Sciences and Engineering Research Council of Canada 567161-21
6 · The paper itself

Abstract

Bentonite is an important component of deep geological repository (DGR) designs, where it will serve as a buffer between used fuel containers (UFCs) and subsurface rock walls of the repository. The potential for microbial activity in bentonite is being studied to understand the influence of microbial metabolisms (e.g., sulfate reduction by sulfate-reducing bacteria) on the long-term safety of the DGRs (e.g., through contributions to microbiologically influenced corrosion). Most studies of microorganisms in bentonite involved culturing microorganisms at 30°C or below, even though the placement room in a DGR is expected to experience elevated temperatures for up to one thousand years after used fuel placement. The purpose of this study was to test the abundance and community composition of microorganisms in as-received and hydrated bentonite at a range of DGR-relevant temperatures (15-105°C) using a combination of cultivation and DNA-based techniques. In certain clays tested, aerobic heterotrophs, anaerobic heterotrophs, and sulfate-reducing bacteria were culturable at 15, 30, 45, and 60°C from both the as-received and hydrated bentonite, demonstrating that the bentonite microbial community includes representatives capable of growth at a range of DGR-relevant temperatures. Although cultivation results showed no significant increase in the abundance of culturable microorganisms from as-received bentonite to hydrated bentonite at temperatures greater than 45°C, sequencing results for two bentonite samples hydrated and incubated at 60°C revealed that 16S rRNA gene profiles were dominated (>99%) by sequences associated with the putative thermophilic family Thermoactinomycetaceae, which was not detectable in the as-received bentonite starting material. Not only does this suggest that as-received bentonite harbours viable thermophiles, but it also highlights the importance of a multifaceted (e.g., cultivation coupled to DNA sequencing) approach to study microbial communities of bentonite.IMPORTANCEPredicting the abundances and types of microorganisms that may be active within a deep geological repository is critical to ensure that DGR design specifications minimize or prevent microbially mediated deterioration of DGR components. To date, research in this area has focused on the effect of bentonite dry density and the associated swelling pressure on suppression of microbial growth, but most of these experiments have been conducted at relatively low temperatures (e.g., 30°C). Studying the microbiology of bentonite exposed to elevated temperatures is critical given that a DGR is expected to experience high temperatures for up to one thousand years.

Indexed as

BacteriaBentoniteMicrobiotaTemperatureArchaeaDNA, BacterialPhylogenyRNA, Ribosomal, 16SSoil MicrobiologyBentoniteDNA, BacterialRNA, Ribosomal, 16Sbacteriabentonitedeep geological repositorynuclear waste storagesulfate-reducing bacteriatemperature

Identifiers

PMID40778756
PMCPMC12482174

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.