Evidence map›Paper›PMID 40777404›Full record

ArticlebioRxiv : the preprint server for biology2025

Global inhibition of deadenylation stabilizes the transcriptome in mitotic cells.

Ekaterina Khalizeva, Arash Latifkar, David P Bartel, Jimmy Ly, Iain M Cheeseman

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ekaterina KhalizevaWhitehead Institute for Biomedical Research, Cambridge, United States.ORCID 0009-0003-1060-0835
Arash LatifkarWhitehead Institute for Biomedical Research, Cambridge, United States.
David P BartelWhitehead Institute for Biomedical Research, Cambridge, United States.ORCID 0000-0002-3872-2856
Jimmy LyWhitehead Institute for Biomedical Research, Cambridge, United States.
Iain M CheesemanWhitehead Institute for Biomedical Research, Cambridge, United States.ORCID 0000-0002-3829-5612

Funding

Molecular Analysis of Kinetochore FunctionR35GM126930 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI Iain McPherson Cheeseman · 2018 to 2026
$7.0M
The role of lysosomal deregulation in cancer progressionK00CA234921 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI LATIFKAR, ARASH · 2020 to 2023
$396k
NCI NIH HHS K00 CA234921NIGMS NIH HHS R35 GM126930
6 · The paper itself

Abstract

In the presence of cell division errors, mammalian cells can pause in mitosis for tens of hours with little to no transcription, while still requiring continued translation for viability. These unique aspects of mitosis require substantial adaptations to the core gene expression programs. Indeed, during interphase, the homeostatic control of mRNA levels involves a constant balance of transcription and degradation, with a median mRNA half-life of ~2-4 hours. If such short mRNA half-lives persisted in mitosis, cells would be expected to quickly deplete their transcriptome in the absence of new transcription. Here, we report that the transcriptome is globally stabilized during prolonged mitotic delays. Typical mRNA half-lives are increased >4-fold in mitosis compared to interphase, thereby buffering mRNA levels in the absence of new synthesis. Moreover, the poly(A)-tail-length profile of mRNAs changes in mitosis, strongly suggesting a mitotic repression of deadenylation. We further show that mRNA stabilization in mitosis is dependent on cytoplasmic poly(A)-binding proteins PABPC1&4. Depletion of PABPC1&4 disrupts the maintenance of mitotic arrest, highlighting the critical physiological role of mitotic transcriptome buffering.

Identifiers

PMID40777404
PMCPMC12330540

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.