Evidence map›Paper›PMID 40776549›Full record

ArticleThe plant pathology journal2025

Design and Validation of Specific qPCR Primers for Soil-Borne and Apple Tree-Associated Phytopathogenic Fungi.

Gudam Kwon, Kook-Hyung Kim

Abstract read
In one paragraph

Article in The plant pathology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Gudam KwonDepartment of Agricultural Biotechnology, College of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Korea.
Kook-Hyung KimDepartment of Agricultural Biotechnology, College of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Korea.

Funding

Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, and ForestryMinistry of Agriculture, Food and Rural Affairs RS-2024-00398300Ministry of Science of Information TechnologyNational Research Foundation of Korea RS-2024-00339085Rural Development Administration RS-2024-00401414
6 · The paper itself

Abstract

Soil-borne pathogenic fungi cause substantial economic losses worldwide by infecting the underground parts of plants. In fruit trees, infections are especially damaging, as they often result in the death of the entire plant. Therefore, early detection is essential for effective disease management caused by soil-borne pathogens. In this study, we designed and validated real-time PCR primers targeting eight soil-borne and apple tree-associated phytopathogenic fungi. Each primer set successfully detected 20 ng of target genomic DNA (gDNA) within 25 cycles, while the same amount of non-target gDNA mixture was detected only after 35 cycles of amplification. Moreover, target DNA amplification remained unaffected in the presence of mixed non-target gDNA background, confirming the high specificity of the primers. Sensitivity test showed that 1 fg of plasmid DNA, corresponding to about 290 copies, was detectable around 30 cycles with all primer sets. These primers support accurate pathogen detection and early diagnosis in various environmental samples.

Indexed as

phytopathogenic fungiqPCR primerssoil-borne pathogen

Identifiers

PMID40776549
PMCPMC12332406

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.