ArticleNature communications2025
Sensitive neoantigen discovery by real-time mutanome-guided immunopeptidomics.
Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
10 citing papers in PubMed.
- Toward next-generation therapeutic HPV vaccines: A review on expanding the antigen repertoire and an integrated bioinformatics selection framework.Human vaccines & immunotherapeutics · 2026Review
- Mapping the functional dark proteome in cancer.Nature reviews. Cancer · 2026Review
- Review
- A Platform for High-throughput and Ultrasensitive Immunopeptidomics.Molecular & cellular proteomics : MCP · 2026Article
- Advances in predicting T cell epitope recognition for cancer immunotherapy.Nature cancer · 2026Review
- Five dominant amino acid substitution signatures shape tumour immunity.Molecular systems biology · 2026Article
- Review
- mRNA processing in cancer immunotherapy: emerging targets, resistance mechanisms, and therapeutic opportunities.Frontiers in immunology · 2026Review
- Immunosuppressive tumor microenvironment and immunotherapy resistance of esophageal carcinoma.Frontiers in immunology · 2026Review
- Rewiring tumor visibility: The immunopeptidome as a dynamic interface between antigen processing, microenvironmental stress, and immune recognition.Frontiers in oncology · 2025Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
Targeting cancer-specific HLA-peptide complexes is a promising approach in immunotherapy. Mutated neoantigens are excellent targets due to their immunogenicity and cancer-specificity. Mass spectrometry (MS)-based immunopeptidomics guides the selection of naturally presented immunogenic targets within the immunopeptidome, refining immunogenicity predictions. Implementation in clinical settings, however, must achieve global depth, capturing the entirety of the immunopeptidome, maintain high target sensitivity, and cater to scarce sample inputs and short turnaround time. Here, we present NeoDiscMS, an extension of NeoDisc that enables the acquisition of personalized immunopeptidomics data. Leveraging next-generation sequencing-guided real-time spectral acquisitions, NeoDiscMS maximizes sensitivity with minimal loss of global depth. Designed for effectiveness and ease of use, with minimal effort required for implementation, NeoDiscMS enhances the detection of peptides derived from tumor-associated antigens by up to 20% and improves confidence in neoantigen identification compared to the gold standard method. NeoDiscMS advances personalization in clinical antigen discovery with more confident neoantigen detection and easy implementation.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.