Evidence map›Paper›PMID 40775069›Full record

ArticleScientific reports2025

Bacterial indicators of environmental stress in the gut microbiome of free-ranging European roe deer inhabiting agricultural landscapes.

Rafał Łopucki, Ewa Sajnaga, Kinga Ożga, Dagmara Stępień-Pyśniak, Arkadiusz Jastrzębski, Marcin Świątek, Marta Kloch, Ilona Sadok, Paweł Nasiadka, Petter Kjellander and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Rafał ŁopuckiDepartment of Biomedicine and Environmental Research, The John Paul II Catholic University of Lublin, Konstantynów 1J, Lublin, 20-708, Poland. lopucki@kul.pl.
Ewa SajnagaDepartment of Biomedicine and Environmental Research, The John Paul II Catholic University of Lublin, Konstantynów 1J, Lublin, 20-708, Poland.
Kinga OżgaDepartment of Biomedicine and Environmental Research, The John Paul II Catholic University of Lublin, Konstantynów 1J, Lublin, 20-708, Poland.
Dagmara Stępień-PyśniakDepartment of Veterinary Prevention and Avian Diseases, University of Life Sciences in Lublin, Głęboka 30, Lublin, 20-612, Poland.
Arkadiusz JastrzębskiDepartment of Biomedical and Analytical Chemistry, The John Paul II Catholic University of Lublin, Konstantynów 1J, Lublin, 20-708, Poland.
Marcin ŚwiątekDepartment of Animal Breeding and Nutrition, Warsaw University of Life Sciences (SGGW), Ciszewskiego 8, Warsaw, 02-786, Poland.
Marta KlochDepartment of Animal Genetics and Conservation, Warsaw University of Life Sciences (SGGW), Ciszewskiego 8, Warsaw, 02-786, Poland.
Ilona SadokDepartment of Biomedical and Analytical Chemistry, The John Paul II Catholic University of Lublin, Konstantynów 1J, Lublin, 20-708, Poland.
Paweł NasiadkaDepartment of Animal Genetics and Conservation, Warsaw University of Life Sciences (SGGW), Ciszewskiego 8, Warsaw, 02-786, Poland.
Petter KjellanderDepartment of Ecology, Grimsö Wildlife Research Station, Swedish University of Agricultural Sciences, Riddarhyttan, 73993, Sweden.
Daniel KlichDepartment of Animal Genetics and Conservation, Warsaw University of Life Sciences (SGGW), Ciszewskiego 8, Warsaw, 02-786, Poland.

Funding

Katolicki Uniwersytet Lubelski Jana Pawla II 2023/2/1Narodowe Centrum Nauki 2021/41/B/NZ9/04442
6 · The paper itself

Abstract

Environmental stressors can influence the gut microbiota of wild ruminants, yet their effects in free-ranging populations remain poorly understood. This study examined associations between physiological stress and gut microbiota composition in free-ranging European roe deer (Capreolus capreolus) from agricultural landscapes in central Poland. Fecal samples from 54 legally hunted individuals were analyzed for cortisol metabolite concentrations and bacterial community composition using 16S rRNA gene sequencing. Cortisol metabolite levels ranged from 17.9 to 371.4 ng ml⁻¹, allowing classification into low- and high-stress groups. Alpha diversity metrics did not differ between groups, but beta diversity analyses revealed significant differences in microbial community structure linked to stress. Stress remained a significant predictor of microbiota composition even after adjusting for confounding variables such as area and season, with its effect varying by context. Ratios of Christensenellaceae to Rikenellaceae, Bacteroidaceae and Prevotellaceae were significantly elevated in the high-stress group, indicating potential as microbial biomarkers of physiological stress. Additionally, Barnesiellaceae and Succinivibrionaceae (families involved in immune modulation and fermentation) were depleted under higher stress conditions. These findings highlight the role of gut microbiota in responses to environmental stressors and suggest that microbial signatures could serve as biomarkers for assessing the impact of agriculture on wildlife health and ecosystem stability.

Indexed as

BacteriaDeerGastrointestinal MicrobiomeStress, PhysiologicalAgricultureAnimalsFecesHydrocortisonePolandRNA, Ribosomal, 16SHydrocortisoneRNA, Ribosomal, 16SBacteriaCapreolus CapreolusCortisolGut microbiotaRuminantsStress hormonesUngulates

Identifiers

PMID40775069
PMCPMC12332138

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.