Evidence map›Paper›PMID 40772389›Full record

ArticleThe New phytologist2025

Genetic variation among progeny shapes symbiosis in a basidiomycete with poplar.

Benjamin Dauphin, Maíra de Freitas Pereira, Daniel Croll, Thalita Cardoso Anastácio, Laure Fauchery, Frédéric Guinet, Maurício Dutra Costa, Francis Martin, Martina Peter, Annegret Kohler

Abstract read
In one paragraph

Article in The New phytologist, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Benjamin Dauphin *Swiss Federal Research Institute WSL, Zuercherstrasse 111, Birmensdorf, 8903, Switzerland.ORCID https://orcid.org/0000-0003-0982-4252
Maíra de Freitas Pereira *Université de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.ORCID https://orcid.org/0000-0003-4960-6225
Daniel CrollLaboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, 2000, Neuchâtel, Switzerland.ORCID https://orcid.org/0000-0002-2072-380X
Thalita Cardoso AnastácioDepartment of Microbiology/BIOAGRO, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-000, Brazil.ORCID https://orcid.org/0009-0009-9780-2862
Laure FaucheryUniversité de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Frédéric GuinetUniversité de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.
Maurício Dutra CostaDepartment of Microbiology/BIOAGRO, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-000, Brazil.ORCID https://orcid.org/0000-0002-0828-4437
Francis MartinUniversité de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.ORCID https://orcid.org/0000-0002-4737-3715
Martina PeterSwiss Federal Research Institute WSL, Zuercherstrasse 111, Birmensdorf, 8903, Switzerland.ORCID https://orcid.org/0000-0002-6365-6889
Annegret KohlerUniversité de Lorraine, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, UMR Interactions Arbres/Microorganismes, Centre INRAE Grand Est-Nancy, 54280, Champenoux, France.ORCID https://orcid.org/0000-0002-9575-9567

Funding

CNPq Research GrantConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Laboratory of Excellence ARBRE ANR-11-LABX-0002-01
6 · The paper itself

Abstract

Forest trees rely on ectomycorrhizal (ECM) fungi for acquiring scarce resources such as water and nutrients. However, the molecular mechanisms governing ECM traits remain inadequately understood, particularly the role of intraspecific fungal variation in root-tip colonisation and trophic interactions. This study examined six ECM traits using Pisolithus microcarpus, an ECM fungus capable of forming ECM rootlets in poplar. A collection of 40 sibling monokaryons and their parental dikaryon was analysed through genome and transcriptome sequencing to examine quantitative trait loci, gene expression and mating-type loci. These findings revealed a pronounced phenotypic continuum in poplar root colonisation by sibling monokaryons, ranging from incompatible to fully compatible strains. Genetic recombination among monokaryons was demonstrated, and genomic regions potentially involved in ECM fungal traits were identified. Transcriptomic analysis revealed greater differentiation in transcriptomic profiles between fungal strains than between fungal tissues, and uncovered tissue-specific functional responses for ECM and free-living mycelia. Poplar exhibited distinct transcriptomic responses when interacting with different sibling monokaryons and the parental dikaryon. Allele sorting at 11 mating-type loci confirmed the species' heterothallic tetrapolar system. This study advances understanding of the genetic and transcriptomic mechanisms underlying ECM symbioses, highlighting intraspecific fungal diversity's role in forest ecosystem functioning.

Indexed as

BasidiomycotaGenetic VariationPopulusSymbiosisGene Expression Regulation, FungalGenes, Mating Type, FungalMycorrhizaePhenotypePlant RootsQuantitative Trait LociTranscriptomebasidiomyceteectomycorrhizagenomicsmycorrhizationPisolithus microcarpusPopulussymbiosistranscriptomics

Identifiers

PMID40772389
PMCPMC12409109

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.