Evidence map›Paper›PMID 40766148›Full record

ArticlemedRxiv : the preprint server for health sciences2025

Genomic and molecular associations with preoperative immune checkpoint inhibition in patients with stage III clear cell renal cell carcinoma.

Wesley H Chou, Lucy Lawrence, Emma Neham, Shreeram Akilesh, Amy E Moran, Christopher L Corless, Lisa Langmesser, Beyza Cengiz, Kazumi Eckenstein, Jen-Jane Liu and 5 more

Registry-linked trialAbstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02210117 (A Pilot Randomized Tissue-Based Study Evaluating Anti-PD1 Antibody or Anti-PD1 + Bevacizumab or Anti-PD1 + Anti-CTLA-4 in Patients With Metastatic Renal Cell Carcinoma Who Are Eligible for Cytoreductive Nephrectomy, Metastasectomy or Post-Treatment Biopsy), which is not on this map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02210117 early_phase1active not recruitingnot on this map

A Pilot Randomized Tissue-Based Study Evaluating Anti-PD1 Antibody or Anti-PD1 + Bevacizumab or Anti-PD1 + Anti-CTLA-4 in Patients With Metastatic Renal Cell Carcinoma Who Are Eligible for Cytoreductive Nephrectomy, Metastasectomy or Post-Treatment Biopsy

TypeinterventionalSponsorM.D. Anderson Cancer CenterRan2014 to 2026Enrolled104ConditionsClear Cell Renal Cell Carcinoma, Metastatic Kidney Carcinoma, Stage IV Renal Cell Cancer AJCC v7ArmsBevacizumab, Biopsy, Ipilimumab, Laboratory Biomarker Analysis, Metastasectomy
3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Wesley H ChouDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
Lucy LawrenceDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
Emma NehamDepartment of Cell, Developmental and Cancer Biology, Oregon Health & Science University, Portland, Oregon.
Shreeram AkileshDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, Washington.ORCID 0000-0003-3152-7991
Amy E MoranDepartment of Cell, Developmental and Cancer Biology, Oregon Health & Science University, Portland, Oregon.
Christopher L CorlessKnight Cancer Institute, Oregon Health & Science University, Portland, Oregon.
Lisa LangmesserDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
Beyza CengizKnight Cancer Institute, Oregon Health & Science University, Portland, Oregon.
Kazumi EckensteinKnight Cancer Institute, Oregon Health & Science University, Portland, Oregon.
Jen-Jane LiuDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
Sudhir IsharwalDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
Christopher L AmlingDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
Marshall C StrotherDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
Nicholas H ChakiryanDepartment of Urology, Oregon Health & Science University, Portland, Oregon.
George V ThomasKnight Cancer Institute, Oregon Health & Science University, Portland, Oregon.ORCID 0000-0001-7416-8840

Funding

Understanding the origins of rapid recurrence of pancreatic cancer after resectionP30CA069533 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Luiz Eduardo Bertassoni · 1997 to 2026
$60.5M
Developing novel polytherapies for Non-Clear Cell Renal Cell CarcinomaR01CA250378 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI George Victor Thomas · 2021 to 2026
$1.9M
Novel Treatment Strategies for CancerR21CA259440 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI THOMAS, GEORGE VICTOR · 2021 to 2021
$288k
NCI NIH HHS P30 CA069533NCI NIH HHS R01 CA250378NCI NIH HHS R21 CA259440
6 · The paper itself

Abstract

Purpose: Patients with stage III clear cell renal cell carcinoma are at high risk for recurrence after nephrectomy. To mitigate overtreatment, there is a pressing clinical need to determine which patients benefit most from perioperative immune checkpoint inhibition. We performed a multimodal digital spatial analysis of gene and protein expression in stage III primary renal cell carcinomas, a subset of which had preoperative immune checkpoint inhibition exposure. Materials and Methods: Surgically resected tumors from stage III clear cell renal cell carcinoma patients were analyzed using the Nanostring GeoMx Digital Spatial Profiler. Differential expression analysis was performed and validated using NCT02210117 trial data to identify genes associated with immune checkpoint blockade and clinical response. A gene score was then generated to predict overall survival in patients from The Cancer Genome Atlas. Results: Among 19 patients, RNA expression significantly differed based on preoperative immune checkpoint blockade and recurrence - CD8+ effector and central-memory T-cell signatures were less prevalent in the treatment-naïve with recurrence group. Three out of four patients with preoperative immune checkpoint inhibition had recurrence. External validation yielded a 4-gene set ( Discussion: Preoperative immune checkpoint blockade favorably altered the tumor microenvironment to resemble that of treatment-naïve patients without recurrence. However, this did not translate to better clinical outcomes. On external validation, the genes

Indexed as

immune checkpoint inhibitionproteomicsrenal cell carcinomatranscriptomics

Identifiers

PMID40766148
PMCPMC12324644

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.