ArticleFrontiers in plant science2025
Deciphering the molecular signatures of tropical
Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Introduction: Methods: This study integrates physiological profiling with transcriptomic sequencing to systematically investigate the cold-response mechanisms of Results: Multivariate variance analysis revealed that peroxidase (POD) activity and chlorophyll content are significant biomarkers strongly correlated with cold tolerance. A comprehensive investigation into the temporal expression of genes in response to 24 hours of cold stress was conducted, using RNA-seq analysis. This analysis yielded a substantial number of differentially expressed genes (DEGs), amounting to 20,870, which were found to be subject to temporal regulation. KEGG pathway enrichment analysis revealed substantial activation in three metabolic pathways: phytohormone signaling, alkaloid biosynthesis (tropane/piperidine/pyridine), and flavonoid biosynthesis. The application of Weighted Gene Co-expression Network Analysis (WGCNA), in conjunction with a dynamic tree-cutting algorithm, resulted in the identification of 25 co-expression modules. Eigenvector centrality analysis identified six hub genes responsive to cold stress: Discussion: These findings clarify the time series and core physiological indicators of
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