Evidence map›Paper›PMID 40764781›Full record

ArticleScientific reports2025

Retrovirus-based pseudotyped virus neutralisation assays overestimate neutralising activity in sera from participants receiving integrase inhibitors.

Mhairi J McCormack, Patawee Asamaphan, Ellen C Hughes, Louis Banda, Stephen Kasenda, Chris Davis, Agnieszka M Szemiel, Amelia Crampin, Abena S Amoah, Emma C Thomson and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. HIV Virion Capturing Liposomes for Therapeutic Vaccination.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Mhairi J McCormackMedical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK. m.mccormack.1@research.gla.ac.uk.
Patawee AsamaphanMedical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK.
Ellen C HughesMedical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK.
Louis BandaMalawi Epidemiology and Intervention Research Unit (MEIRU), Lilongwe, Malawi.
Stephen KasendaMalawi Epidemiology and Intervention Research Unit (MEIRU), Lilongwe, Malawi.
Chris DavisMedical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK.
Agnieszka M SzemielMedical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK.
Amelia CrampinMalawi Epidemiology and Intervention Research Unit (MEIRU), Lilongwe, Malawi.
Abena S Amoah *Malawi Epidemiology and Intervention Research Unit (MEIRU), Lilongwe, Malawi.
Emma C Thomson *Medical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK.
Antonia Ho *Medical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK.
Brian J Willett *Medical Research Council, University of Glasgow Centre for Virus Research, Glasgow, UK.

Funding

Medical Research Council MC_UU_00034/6Wellcome Trust 217073/Z/19/Z
6 · The paper itself

Abstract

Retroviral pseudotype-based virus neutralisation assays are widely used to estimate functional immunity, but may be unsuitable for testing human immunodeficiency virus (HIV)-infected individuals receiving integrase inhibitor treatment. We evaluated these assays for measuring severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and hepatitis C virus (HCV) neutralisation in people living with HIV. SARS-CoV-2 neutralisation was assessed using HIV-based SARS-CoV-2 pseudoviruses in sera from a longitudinal Malawian cohort (n = 1,876), detecting neutralisation across timepoints in 10.5-54.5% of HIV-uninfected vs. 85.5-93.9% of HIV-infected participants (n = 96). HIV-infected sera were re-tested using vesicular stomatitis virus (VSV)-based SARS-CoV-2 pseudoviruses, estimating seroprevalence at 5.6-65.2%, suggesting HIV-based assays overestimate neutralisation. HIV-based VSV-glycoprotein(G) pseudoviruses confirmed non-specific inhibition in 75.0-87.9% of HIV-infected participants. HCV neutralisation was assessed in UK-based HCV patients (n = 100, n = 90 HIV-infected) using murine leukaemia virus (MLV)-based HCV pseudoviruses. Non-HCV-specific inhibition was detected in integrase inhibitor recipients. Median neutralisation of MLV(HCV) pseudoviruses was higher in integrase inhibitor recipients (71.8% vs. 21.3%). Testing HIV(SARS-CoV-2) and MLV(HCV) pseudoviruses against antiretroviral drugs showed interference by integrase inhibitors (specifically, dolutegravir). Isolating IgG from serum removed the interference by residual drugs. Retrovirus-based assays are therefore unsuitable for testing individuals receiving integrase inhibitors. Protective immunity to viruses has likely been over-reported in HIV prevalent populations.

Indexed as

Antibodies, NeutralizingCOVID-19HIV InfectionsIntegrase InhibitorsNeutralization TestsRetroviridaeSARS-CoV-2AdultAntibodies, ViralFemaleHepacivirusHepatitis CHumansMaleMiddle AgedPyridonesAntibodies, NeutralizingAntibodies, ViralIntegrase InhibitorsPyridonesHIVIntegrase inhibitorsInterferencePseudovirus assay

Identifiers

PMID40764781
PMCPMC12325791

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.