Evidence map›Paper›PMID 40764620›Full record

ArticleScientific reports2025

Complete mitogenomes of venomous fish Paracentropogon rubripinnis and Inimicus japonicus elucidate phylogenetic relationships in Scorpaeniformes.

Sung-Gwon Lee, Seongmin Kim, Chungoo Park

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Sung-Gwon Lee *School of Biological Sciences and Technology, Chonnam National University, Yongbong-ro 77, Gwangju, 61186, Republic of Korea.
Seongmin Kim *School of Biological Sciences and Technology, Chonnam National University, Yongbong-ro 77, Gwangju, 61186, Republic of Korea.
Chungoo ParkSchool of Biological Sciences and Technology, Chonnam National University, Yongbong-ro 77, Gwangju, 61186, Republic of Korea. chungoo@jnu.ac.kr.

Funding

Korea Institute of Marine Science & Technology Promotion (KIMST) funded by the Ministry of Oceans and Fisheries RS-2025-02292973the Ministry of Education (NRF-2022R1A2C1010731 to C.P.), the Global-Learning & Academic research institution for Master's · PhD students, and Postdocs (LAMP) Program of the National Research Foundation of Korea (NRF) grant funded by the Ministry of Education No. RS-2024-00442775
6 · The paper itself

Abstract

The Scorpaeniformes order encompasses a diverse array of teleost fish, including commercially important and venomous species. Fish venoms offer significant pharmacological potential, but incomplete phylogenetic understanding has hindered research. Resolving relationships among venomous fish families is crucial for studying venom evolution and discovering novel bioactive compounds. To address these phylogenetic uncertainties, we generated and assembled the complete mitochondrial genomes of Paracentropogon rubripinnis (Tetrarogidae) and Inimicus japonicus (Synanceiidae), two representative venomous species. The circular mitogenomes, 16,465 bp and 16,676 bp in length, respectively, contain the typical vertebrate mitochondrial gene complement. Comparative analyses revealed a highly conserved gene order and orientation across Scorpaeniformes, with slight variations in the Notothenioidei outgroups. We identified three novel conserved sequence blocks in the control regions and characterized structural features of protein-coding genes, tRNAs, and non-coding elements. Phylogenetic analyses using 13 mitochondrial protein-coding genes from 71 Scorpaeniformes and three outgroup species provided a higher-resolution phylogeny of the order, including 12 families and 31 genera. Our results support the monophyly of Tetrarogidae and Synanceiidae, placing them in an early-diverging position within the Scorpaeniformes phylogeny. This study provides insights into the phylogenetic positions of venomous fish families and lays a foundation for future research on fish venom evolution and applications.

Indexed as

FishesFish VenomsGenome, MitochondrialPerciformesPhylogenyAnimalsEvolution, MolecularRNA, TransferFish VenomsRNA, TransferComplete mitogenomesInimicus japonicusParacentropogon rubripinnisPhylogenetic analysis.Scorpaeniformes evolutionVenomous fishes

Identifiers

PMID40764620
PMCPMC12325652

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