Evidence map›Paper›PMID 40763029›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Regulation of CD45 isoforms during human effector and memory CD8 T cell differentiation: Implications for T cell nomenclature.

Donald J McGuire, Rama S Akondy, Shu Yang, Srilatha Edupuganti, Shashi Nagar, Garett Michael, Stephen C De Rosa, Evan W Newell, Donna L Farber, Haydn T Kissick and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. CD8Cell reports. Medicine · 2026
    Review
  2. Review
  3. Review
  4. Federated single-cell QTL meta-analysis reveals novel disease mechanisms.bioRxiv : the preprint server for biology · 2026
    Article
  5. The Role ofInfection and drug resistance · 2026
    Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Donald J McGuireDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322.
Rama S AkondyTrivedi School of Biosciences, Department of Biology, Ashoka University, Sonipat, Haryana 131029, India.
Shu YangDepartment of Neurology and institute of Neuroimmunology, Tianjin Medical University General Hospital, Tianjin 300052, China.
Srilatha EdupugantiEmory Vaccine Center, Emory University School of Medicine, Atlanta, GA 30322.
Shashi NagarIcon PLC, Midlothian, TX 76065.
Garett MichaelEmory Vaccine Center, Emory University School of Medicine, Atlanta, GA 30322.
Stephen C De RosaVaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA 98109.
Evan W NewellVaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA 98109.ORCID 0000-0002-2889-243X
Donna L FarberDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032.ORCID 0000-0001-8236-9183
Haydn T KissickDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322.
M Juliana McElrathVaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA 98109.
Rafi AhmedDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322.

Funding

Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
VACCINE INDUCED IMMUNITY IN THE YOUNG AND AGEDU19AI057266 · NIAID · EMORY UNIVERSITY · PI Rafi Ahmed · 2003 to 2026
$81.7M
HHS | NIH | NIAID | Division of Intramural Research (DIR, NIAID) U19 AI057266-S1NCATS NIH HHS UL1 TR002378NIAID NIH HHS U19 AI057266
6 · The paper itself

Abstract

This study examines the expression of CD45 isoforms on human yellow fever virus vaccine (YFV-17D) specific CD8 T cells longitudinally after vaccination. As expected, effector CD8 T cells at day 14 express CD45RO but within 4 to 6 wk these virus-specific CD8 T cells become CD45RA positive and remain CD45RA for >10 y. The journey for these YFV-specific CD8 T cells goes from naive (CD45RA+ CCR7+) to effector/effector memory (CD45RO+ CCR7-) to Temra (CD45RA+ CCR7-) to stem-cell memory (CD45RA+ CCR7+). These YFV-specific CD8 T cells rarely acquire the canonical Tcm phenotype (CD45RO+ CCR7+). This CD45RO to RA switch coincides with clearance of YFV, so we hypothesized that antigen may be playing a role in regulating CD45 expression. We addressed this issue by ex vivo analysis and provide evidence that this switch is indeed regulated by antigen. Sorted YFV-specific CD45RO effector CD8 T cells reexpress CD45RA when cultured ex vivo in the absence of antigen and retain CD45RO in the presence of cognate peptide. We also extended these ex vivo analysis to human cytomegalovirus (CMV)-specific CD8 T cells and show that CD45RO cells transition to CD45RA in the absence of antigen and CD45RA cells become CD45RO when stimulated with CMV peptide. We then show that severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike-specific CD8 T cells can repeatedly undergo the same CD45RA to RO to RA transition in vivo after the SARS-CoV-2 mRNA vaccination. Again, the canonical Tcm phenotype spike-specific memory CD8 T cells were not readily detectable. These studies warrant a reevaluation of how human memory CD8 T cells are defined.

Indexed as

CD8-Positive T-LymphocytesCell DifferentiationImmunologic MemoryLeukocyte Common AntigensMemory T CellsCOVID-19HumansProtein IsoformsReceptors, CCR7SARS-CoV-2Yellow Fever VaccineYellow fever virusCCR7 protein, humanLeukocyte Common AntigensProtein IsoformsPTPRC protein, humanReceptors, CCR7Yellow Fever VaccineCD45 isoformscytomegalovirusHuman CD8 T cell nomenclatureSARS-CoV-2yellow fever vaccine

Identifiers

PMID40763029
PMCPMC12358852

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.