Evidence map›Paper›PMID 40761288›Full record

ArticleFrontiers in epigenetics and epigenomics2024

HDAC3 regulates the diurnal rhythms of claudin expression and intestinal permeability.

Hunter Christopher, Jianglin Zhang, Sarah Olanrewaju Oladejo, Samskrathi Aravinda Sharma, Zheng Kuang

Abstract read
In one paragraph

Article in Frontiers in epigenetics and epigenomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. HAT1 Regulates Intestinal Stem Cell Proliferation and Differentiation.bioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hunter ChristopherDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Jianglin ZhangDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Sarah Olanrewaju OladejoDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Samskrathi Aravinda SharmaDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Zheng KuangDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.

Funding

Microbial regulation of mammalian circadian rhythms and the sexual dimorphism: from metabolism to immunityDP2DK136278 · NIDDK · CARNEGIE-MELLON UNIVERSITY · PI KUANG, ZHENG · 2022 to 2025
$2.3M
Microbiota-dependent Epigenetic Regulation of Circadian Rhythms in Nutrient Uptake and Energy HomeostasisR00DK120897 · NIDDK · CARNEGIE-MELLON UNIVERSITY · PI KUANG, ZHENG · 2021 to 2023
$735k
Behavioral quantification through active learning and multidimensional physiological monitoringR34DA059509 · NIDA · CARNEGIE-MELLON UNIVERSITY · PI GROVER, PULKIT, KUANG, ZHENG · 2024 to 2025
$663k
NIDA NIH HHS R34 DA059509NIDDK NIH HHS DP2 DK136278NIDDK NIH HHS R00 DK120897
6 · The paper itself

Abstract

Circadian rhythms play an essential role in the regulation of intestinal absorption and barrier function. Tight junctions, including claudins, are fundamental components of the intestinal epithelial barrier. However, the regulatory mechanisms governing their diurnal expression remain poorly understood. Furthermore, the impact of circadian rhythms on intestinal permeability through claudin modulation has yet to be fully explored. Here we investigated the expression and the diurnal rhythms of claudin transcripts in the intestinal epithelium. We identified histone deacetylase 3 (HDAC3) as an epigenetic regulator that represses claudin expression and drives the diurnal rhythms via histone deacetylation. Loss of HDAC3 leads to increased intestinal permeability and dampened its diurnal rhythm. We further revealed that HDAC3 affects the basolateral localization of claudin-3. Together, our findings give insights into epigenetic modification in regulating tight junction and its diurnal rhythms, providing targets for therapeutic mediations in gastrointestinal disorders.

Indexed as

circadian rhythmsclaudinHDAC3histone deacetylationintestinal permeabilityRNA-sequencing data analysistight junctions

Identifiers

PMID40761288
PMCPMC12320956

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.