Evidence map›Paper›PMID 40760076›Full record

ArticleScientific reports2025

Irrigation water quality shapes soil microbiomes: a 16 S rRNA-based biogeographic study in arid ecosystems.

Mennatallah S Abdelkader, Salah Abdalla, Ali A Abdelrahman, Ibrahim A Amin, Mohammed Ramadan, Mohammed Salah

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mennatallah S AbdelkaderDepartment of Microbiology and Immunology, Faculty of Pharmacy, Port-Said University, Port-Said, Egypt. menna.abdelkhader@pharm.psu.edu.eg.
Salah AbdallaDepartment of Microbiology and Immunology, Faculty of Pharmacy, Suez Canal University, Ismailia, Egypt.
Ali A AbdelrahmanDepartment of Microbiology and Immunology, Faculty of Pharmacy, Suez Canal University, Ismailia, Egypt.
Ibrahim A AminDepartment of Microbiology and Immunology, Faculty of Pharmacy, Al-Azhar University, Assiut, Egypt.
Mohammed RamadanDepartment of Microbiology and Immunology, Faculty of Pharmacy, Al-Azhar University, Assiut, Egypt. mohamedhussien@azhar.edu.eg.
Mohammed SalahDepartment of Microbiology and Immunology, Faculty of Pharmacy, Port-Said University, Port-Said, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil microbiome plays a crucial role in ecosystem; however, the responses of the soil microbiome to nonconventional irrigation water sources remain poorly understood. This study employed 16 S rRNA sequencing to investigate microbial community shifts in soil samples collected from four geographically distinct locations affected by different irrigation water sources: saline ground water affected by seawater (SW), a brackish water lake (BW), a wastewater drain (WW), and a freshwater canal that receives inflows from multiple agricultural drains (FW). Our findings revealed distinct microbial signatures shaped by water quality, with Firmicutes dominating WW soils (49.2%) due to metal resistance (DESeq2, p = 3.67 × 10

Indexed as

Agricultural IrrigationMicrobiotaRNA, Ribosomal, 16SSoil MicrobiologyWater QualityBacteriaDesert ClimateEcosystemSoilRNA, Ribosomal, 16SSoil16S rRNA sequencingBioremediationIrrigation water qualityMicrobial adaptationSalinity stressSoil microbiome

Identifiers

PMID40760076
PMCPMC12322162

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.