Evidence map›Paper›PMID 40758668›Full record

ArticlePloS one2025

Evaluation of an alternative positive control strain of Salmonella enterica subsp. enterica serovar Typhimurium for microbial assays.

Yu-Si Lee, Su-Hyeon Joung, Yongchjun Park, Seung Hwan Kim, Soon Han Kim, Insun Joo, Eun Sook An

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yu-Si LeeDivision of Food Microbiology, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, Republic of Korea.
Su-Hyeon JoungDivision of Food Microbiology, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, Republic of Korea.
Yongchjun ParkDivision of Food Microbiology, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, Republic of Korea.
Seung Hwan KimDivision of Food Microbiology, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, Republic of Korea.
Soon Han KimDivision of Food Microbiology, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, Republic of Korea.
Insun JooDivision of Food Microbiology, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, Republic of Korea.
Eun Sook AnDivision of Food Microbiology, National Institute of Food and Drug Safety Evaluation, Ministry of Food and Drug Safety, Cheongju, Republic of Korea.ORCID https://orcid.org/0000-0003-4938-4124

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Officially certified microbiological testing methods utilize positive control strains to enhance experimental reproducibility and ensure standardized procedures among experimenters. Salmonella enterica subsp. enterica serovar Typhimurium ATCC 14028 is designated as a positive control strain for microbiological testing by the International Organization for Standardization, the Korean Pharmacopoeia, and Ministry of Food and Drug Safety (MFDS) foodborne investigation methods. However, using such foreign strains involves complicated import procedures and significant financial burdens. In this study, we aimed to select a domestic isolate strain that can replace S. Typhimurium ATCC 14028. The target strains used were S. Typhimurium strains preserved in the Korean Culture Collection for foodborne pathogens (MFDS). To confirm the equivalent characteristics between the candidate strains and the positive control strain, biochemical and molecular characterization were performed according to the methods specified in ISO test methods, the Food Code, and the MFDS food poisoning investigation methods. After biochemical and molecular biological analyses on 19 S. Typhimurium strains, only those exhibiting equivalent characteristics underwent whole-genome sequencing. In the biochemical characterization, two strains showed different results in the citrate utilization test. Excluding these, the remaining 17 strains were subjected to molecular analysis (PCR), and all showed identical genetic profiles to the positive control strain. Ultimately, whole-genome sequencing of the 17 selected candidate strains revealed that strains 1004022 and 1004023 shared the same sequence type (ST19) as S. Typhimurium ATCC 14028, exhibited fewer than 20 SNPs, and showed 99.94% genomic homology. Therefore, S. Typhimurium MFDS 1004022 and 1004023 were proposed as suitable domestic alternative to the imported strain. It is anticipated that the distribution of these alternative strains to microbiological testing laboratories will contribute to food safety management by supporting microbial testing and analysis.

Indexed as

Food MicrobiologySalmonella entericaSalmonella typhimuriumGenome, BacterialRepublic of KoreaWhole Genome Sequencing

Identifiers

PMID40758668
PMCPMC12321117

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.