Evidence map›Paper›PMID 40756963›Full record

ArticleData science in science2024

TIME-VARYING

Tong Shen, Mingyu DU, Kevin Johnston, Gyorgy Lur, Xiangmin Xu, Hernando Ombao, Michele Guindani, Zhaoxia Yu

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Data science in science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tong ShenDepartment of Statistics, University of California Irvine.
Mingyu DUCenter for Complex Biological Systems, University of California Irvine.
Kevin JohnstonDepartment of Mathematics and The NSF-Simons Center for Multiscale Cell Fate Research, University of California, Irvine.
Gyorgy LurDepartment of Neurobiology and Behavior University of California, Irvine.
Xiangmin XuDepartment of Anatomy and Neurobiology, School of Medicine, University of California, Irvine.
Hernando OmbaoStatistics Program, KAUST, Thuwal, SA.
Michele GuindaniDepartment of Biostatistics, University of California, Los Angeles.
Zhaoxia YuDepartment of Statistics, University of California, Irvine.

Funding

Subiculm circuits for cortical feedback regulation of spatial mapping and learningR01NS104897 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NITZ, DOUGLAS ARTHUR, XU, XIANGMIN · 2018 to 2022
$2.6M
Cortical mechanisms of stress-induced cognitive impairmentR01MH123686 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI LUR, GYORGY · 2020 to 2024
$2.4M
NIMH NIH HHS R01 MH123686NINDS NIH HHS R01 NS104897
6 · The paper itself

Abstract

Optical imaging of genetically encoded calcium indicators is a powerful tool to record the activity of a large number of neurons simultaneously over a long period of time from freely behaving animals. However, determining the exact time at which a neuron spikes and estimating the underlying firing rate from calcium fluorescence data remains challenging, especially for calcium imaging data obtained from a longitudinal study. We propose a multi-trial time-varying

Indexed as

Calcium imagingFiring rateℓ0 regularizationSpike detectionTime-varying penalty

Identifiers

PMID40756963
PMCPMC12316062

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.