Evidence map›Paper›PMID 40753410›Full record

ArticleBMC plant biology2025

Phenotypic variability and genome-wide association studies in potato (Solanum tuberosum L.) for phosphorus efficiency.

Mousumi Hazarika, Klaus J Dehmer, Ralf Uptmoor, Mareike Kavka, Julian Kirchgesser, Doerte Harpke, Silvia Bachmann-Pfabe

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mousumi HazarikaSatellite Collections North, Gross Luesewitz Potato Collections (GLKS), Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Parkweg 3a, Sanitz OT, Gross Luesewitz, 18190, Germany.ORCID http://orcid.org/0000-0001-6977-9313
Klaus J DehmerSatellite Collections North, Gross Luesewitz Potato Collections (GLKS), Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Parkweg 3a, Sanitz OT, Gross Luesewitz, 18190, Germany. dehmer@ipk-gatersleben.de.ORCID http://orcid.org/0000-0003-3735-5051
Ralf UptmoorAgronomy, Faculty for Agricultural and Environmental Sciences, University of Rostock, Justus-von-Liebig-Weg 6, Rostock, 18059, Germany.ORCID http://orcid.org/0000-0001-5752-0910
Mareike KavkaSatellite Collections North, Gross Luesewitz Potato Collections (GLKS), Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Parkweg 3a, Sanitz OT, Gross Luesewitz, 18190, Germany.ORCID http://orcid.org/0000-0003-0124-1167
Julian KirchgesserAgronomy, Faculty for Agricultural and Environmental Sciences, University of Rostock, Justus-von-Liebig-Weg 6, Rostock, 18059, Germany.
Doerte HarpkeExperimental Taxonomy (ETX), Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, Seeland, Gatersleben, OT, D-06466, Germany.ORCID http://orcid.org/0000-0003-1667-2912
Silvia Bachmann-PfabeSatellite Collections North, Gross Luesewitz Potato Collections (GLKS), Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Parkweg 3a, Sanitz OT, Gross Luesewitz, 18190, Germany.ORCID http://orcid.org/0000-0002-2471-7538

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPotatoes require phosphorus (P) for growth, tuber production and starch quality, but their small and shallow root system limits the nutrient acquisition. This results in excessive use of mineral P fertilisers, leading to environmental and economic concerns due to resource depletion. Identifying potato genotypes with high P efficiency and understanding the underlying genes responsible are crucial for molecular breeding and crop improvement. The present study aims at exploring the phenotypic and genotypic variation among potato genotypes from Gross Luesewitz Potato Collections (GLKS) and identifying markers significantly associated with P efficiency.

resultsPhenotypic characterisation of a diversity set of 200 potato accessions for their response to P deprivation in a pot experiment showed a significant variance regarding biomass production, root length, plants height and P efficiency between the genotypes, with moderate to high heritability for these traits. Shoot biomass decreased by 66% on average under low P, while the root biomass decreased by 36% on average. The extent of the reduction was genotype specific, with some genotypes exhibiting higher root biomass and longer root length under low P than in control conditions. Outstanding genotypes were identified such as GLKS 11,578 (Kristall) with a dense and shallow root system or GLKS 10,591 (Tiger) with a long and extensive root system. Genome-wide association analysis identified 27 unique significant marker-trait associations including 13 associated with biomass, 3 with plant height and 11 with P efficiency, with a majority of them related to P utilization efficiency (7) and shoot biomass (11).

conclusionOur research is one the firsts to present a genome-wide association study in potatoes for P efficiency. Our study highlighted significant phenotypic variation among the genotypes, while promising targets for improving P efficiency traits in potato through genomic selection and marker-assisted breeding.

Indexed as

PhosphorusSolanum tuberosumBiomassGenetic VariationGenome-Wide Association StudyGenotypePhenotypePlant RootsPhosphorusDiversityGenebankGenetic resourcesNutrient efficiencyPot experiment

Identifiers

PMID40753410
PMCPMC12317545

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.