Evidence map›Paper›PMID 40753368›Full record

ArticleBMC plant biology2025

Genome-wide characterization of the cytochrome P450 gene family in Solanum melongena and functional analysis of SmCYP82C1 under cold stress.

Yanhong Lan, Fangyi Gong, Xiaojun Liu, Duchen Liu, Genyun Liang, Chun Li, Feng Xia, Yifan Li, Chao Fang, Peng Cai

Abstract read
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Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yanhong LanVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Fangyi GongVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Xiaojun LiuVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Duchen LiuVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Genyun LiangVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Chun LiVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Feng XiaVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Yifan LiVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China.
Chao FangVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China. saasfangchao@163.com.
Peng CaiVegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, China. cp215@163.com.

Funding

Free Exploration Project of the Institute of Horticulture, Sichuan Academy of Agricultural Sciences grant number 2025ZYTS07Sichuan Academy of Agricultural Sciences Talent Development Initiative NKYRCZX2025005Sichuan innovation team of national modern agricultural industry technology system grant number SCCXTD-2024-5Sichuan Province Engineering Technology Research Center of Vegetables grant number 2023PZSC0301Sichuan Provincial Science and Technology Plan Project grant number 2021YFYZ0022, 2021YFYZ0010the 1+9 Program of SAAS grant number1+9KJGG03
6 · The paper itself

Abstract

backgroundEggplant (Solanum melongena L.), a nutritionally valuable solanaceous crop, exhibits pronounced sensitivity to cold stress, which limits its growth and development. Cytochrome P450 (CYP450) enzymes are widely implicated in plant developmental regulation and abiotic stress responses; however, their functional roles in eggplant remain unexplored.

resultsIn this study, we systematically identified 176 SmCYP450 homologs in the eggplant genome, which were phylogenetically classified into 24 distinct subfamilies. Evolutionary analysis revealed that segmental duplication events predominantly drove the expansion of the SmCYP450 family, and codon usage bias within these genes was primarily shaped by natural selection pressures. Notably, transcriptomic profiling identified SmCYP82C1 as a cold-responsive candidate, displaying significant upregulation under cold stress. Heterologous overexpression of SmCYP82C1 in Arabidopsis thaliana enhanced plant cold tolerance, as evidenced by significantly reduced malondialdehyde (MDA) accumulation and elevated activities of key antioxidant enzymes: catalase (CAT), superoxide dismutase (SOD), and peroxidase (POD), under cold stress relative to wild-type controls. Furthermore, transgenic lines exhibited upregulated expression of cold-signaling regulators (CBF1/2/3, ICE1) and the stress-responsive marker COR47, suggesting activation of conserved cold-adaptation pathways. Yeast one-hybrid and dual-luciferase reporter assays demonstrated that the zinc-finger transcription factor SmZIP1 directly binds to the SmCYP82C1 promoter to transcriptionally activate its expression.

conclusionThis study therefore offers a new gene target to improve cold stress tolerance in eggplant and reveals that SmCYP82C1 enhances cold tolerance through dual mechanisms: mitigating oxidative damage via antioxidant system potentiation and modulating stress-associated gene networks.

Indexed as

Cold-Shock ResponseCytochrome P-450 Enzyme SystemPlant ProteinsSolanum melongenaArabidopsisCold TemperatureGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenyPlants, Genetically ModifiedCytochrome P-450 Enzyme SystemPlant ProteinsCold stressCYP450 gene familyGenome-wide analysisSolanum melongena

Identifiers

PMID40753368
PMCPMC12317560

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.