Evidence map›Paper›PMID 40750719›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2025

Alternative splicing-mediated regulation of a novel allele of Badh2 drives moderate accumulation of 2-AP in rice.

Xueyu Liang, Ying Chen, Kai Liu, Min Guo, Danhua Zhou, Cuihong Huang, Tao Guo, Hui Wang, Guili Yang

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xueyu LiangNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China.ORCID http://orcid.org/0009-0002-7610-1505
Ying ChenNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China.
Kai LiuNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China.
Min GuoNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China.
Danhua ZhouNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China.
Cuihong HuangNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China.
Tao GuoNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China.
Hui WangNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China. wanghui@scau.edu.cn.
Guili YangNational Plant Space Breeding Engineering Technology Research Center, South China Agricultural University, Guangzhou, 510642, China. yanggl@scau.edu.cn.

Funding

Department of Agriculture and Rural Affairs of Zhejiang Province 2022-NPY-00-006Modern Agricultural Technology Industry System of Shandong province CARS-01-06
6 · The paper itself

Abstract

key messageA novel allele of Badh2, badh2-I11 undergoes alternative splicing and leads to reduced Badh2 expression and enhanced 2-AP accumulation in rice. Aroma is a crucial quality trait in rice and is primarily regulated by the Badh2 gene located on chromosome 8. In this study, we identified a novel allele of Badh2, badh2-I11, in the aromatic rice variety, Hei126 (H126). This allele harbors a 55-bp deletion in intron 11, inducing alternative splicing, that generates both wild-type transcripts and aberrant transcripts containing a premature stop codon. Consequently, Badh2 mRNA levels are reduced, leading to moderate accumulation of the aromatic compound 2-acetyl-1-pyrroline (2-AP). Genetic analysis of an F

Indexed as

Alternative SplicingGene Expression Regulation, PlantOryzaPlant ProteinsPyrrolesAllelesGenes, PlantGenotypeIntronsPhenotype2-acetyl-1-pyrrolinePlant ProteinsPyrroles

Identifiers

PMID40750719

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.