Evidence map›Paper›PMID 40748775›Full record

ArticleEnvironmental microbiology reports2025

Unveiling the Genetic Diversity and Antimicrobial Resistance Profiles of Salmonella Population From 2016 to 2020 in Thai Canal Water.

Jirachaya Toyting-Hiraishi, Toyotaka Sato, Neunghatai Supha, Yuwanda Thongpanich, Motohiro Horiuchi, Jeewan Thapa, Chie Nakajima, Yasuhiko Suzuki, Fuangfa Utrarachkij

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Environmental microbiology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jirachaya Toyting-HiraishiDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.ORCID https://orcid.org/0009-0001-6083-8767
Toyotaka SatoLaboratory of Veterinary Hygiene, Faculty of Veterinary Medicine, Hokkaido University, Sapporo, Japan.
Neunghatai SuphaDepartment of Microbiology, Faculty of Public Health, Mahidol University, Bangkok, Thailand.
Yuwanda ThongpanichDepartment of Microbiology, Faculty of Public Health, Mahidol University, Bangkok, Thailand.
Motohiro HoriuchiLaboratory of Veterinary Hygiene, Faculty of Veterinary Medicine, Hokkaido University, Sapporo, Japan.
Jeewan ThapaDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.
Chie NakajimaDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.
Yasuhiko SuzukiDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.ORCID https://orcid.org/0000-0002-1313-1494
Fuangfa UtrarachkijDepartment of Microbiology, Faculty of Public Health, Mahidol University, Bangkok, Thailand.

Funding

Japan Agency for Medical Research and Development 23gm1610012h0001Japan Agency for Medical Research and Development JP20ak0101118h0002Japan Agency for Medical Research and Development JP233fa627005Japan Agency for Medical Research and Development JP23ama121039Japan Agency for Medical Research and Development JP23wm0125008Japan Science and Technology Agency 23HA2010Japan Society for the Promotion of Science 22K0599902Japan Society for the Promotion of Science JP21H03622Japan Society for the Promotion of Science JP22K19416
6 · The paper itself

Abstract

Salmonella is one of the important pathogens causing acute gastroenteritis, and antimicrobial-resistant Salmonella raises a critical public health concern. Canals in Bangkok, Thailand, play a vital role as sources of agricultural and daily water usage. By employing whole genome sequencing to analyse 351 Salmonella genomes isolated between 2016 and 2020, we expanded the understanding of the characteristics and antimicrobial resistance properties of Salmonella enterica found in Bangkok canals, an underrepresented biome in research. Salmonella Agona was the dominant serotype, while S. Typhimurium and its monophasic variant were periodically found. Seven new sequence types (STs) were identified, including STs 11,346, 11,347, 11,348, 11,349, 11,350, 11,351, and 11,352. Seven chromosomal-mediated gene mutations and 50 antimicrobial resistance genes were detected. The three most common resistance genes were tet(A), bla

Indexed as

Anti-Bacterial AgentsGenetic VariationGenome, BacterialHumansMicrobial Sensitivity TestsPhylogenyAnti-Bacterial Agentsantimicrobial resistancecanalsenvironmental healthSalmonellaThailandwhole genome sequencing

Identifiers

PMID40748775
PMCPMC12315854

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.