Evidence map›Paper›PMID 40748059›Full record

ArticleAmerican journal of respiratory cell and molecular biology2025

Best Practices in the Development and Use of Experimental Models of Bacterial Pneumonia: An Official American Thoracic Society Workshop Report.

Amali E Samarasinghe, Scott H Randell, Hrishikesh S Kulkarni, Jeffrey N Weiser, Lee J Quinton, Robert P Dickson, Joseph P Mizgerd, Carlos J Orihuela, Dane Parker, Keven M Robinson and 17 more

Abstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Amali E SamarasingheORCID 0000-0002-3104-2823
Hrishikesh S KulkarniORCID 0000-0003-4830-5084
Carlos J OrihuelaORCID 0000-0002-8542-4069
Alice S Prince
Samithamby JeyaseelanORCID 0000-0002-1959-1328
Marisa I Gómez
Rebecca L Walker
Gee W Lau
Martin Witzenrath
Charles S Dela CruzORCID 0000-0002-5258-1797

Funding

Inducible epithelial resistance: a program investigating mechanisms to protect against acute and chronic complications of pneumoniaR35HL144805 · NHLBI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI EVANS, SCOTT E. · 2019 to 2025
$6.2M
Pulmonary pathophysiology sub-phenotypes of pneumoniaR01AI162850 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI JOSEPH P MIZGERD · 2022 to 2026
$4.0M
Mechanisms of Pneumococcal Persistence During CarriageR37AI038446 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Jeffrey Neal Weiser · 2020 to 2026
$3.8M
LOX-1 as a protective countermeasure in response to lung infectionR01HL165718 · NHLBI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Lee Quinton · 2023 to 2026
$3.0M
Research Supplement for Alveolar Responses to Viral Lung InfectionR01HL164821 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Jaime Lynn Hook · 2022 to 2026
$2.6M
Molecular mechanisms underlying organ penetration in disseminated pneumococcal infectionR01AI172796 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Carlos J Orihuela, Min Xie · 2023 to 2026
$2.6M
Fibrin in the Infected LungR01HL171499 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI JOSEPH P MIZGERD · 2024 to 2026
$2.3M
CD4+ T cell Immunity in the Respiratory TractR35HL177381 · NHLBI · TULANE UNIVERSITY OF LOUISIANA · PI JAY K KOLLS · 2025 to 2026
$2.1M
Immune crosstalk in lung injury and fibrosisR35HL176572 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Bethany B. Moore · 2025 to 2026
$2.1M
PspA binds necroptotic cells to cause disease and transmitR01AI156898 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ORIHUELA, CARLOS J · 2020 to 2024
$2.0M
Eosinophils as Effectors of Antibacterial Immunity in the LungsR01HL171137 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Amali E Samarasinghe · 2024 to 2026
$1.8M
Mechanism of PsrP mediated adhesionR01AI078972 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI ORIHUELA, CARLOS J · 2009 to 2013
$1.3M
NHLBI NIH HHS R01 HL164821NHLBI NIH HHS R01 HL165718NHLBI NIH HHS R01 HL171137NHLBI NIH HHS R01 HL171499NHLBI NIH HHS R35 HL144805NHLBI NIH HHS R35 HL176572NHLBI NIH HHS R35 HL177381NIAID NIH HHS R01 AI078972NIAID NIH HHS R01 AI156898NIAID NIH HHS R01 AI162850NIAID NIH HHS R01 AI172796NIAID NIH HHS R21 AI176193NIAID NIH HHS R37 AI038446
6 · The paper itself

Abstract

The global incidence of respiratory infectious diseases caused by bacteria continues to increase, with acute lower respiratory tract infections contributing to significant morbidity and mortality. Preclinical models designed to investigate such respiratory bacterial diseases are of utmost importance to decipher their pathogenesis and develop novel targets for intervention and treatment. Animal models offer the powerful ability to investigate different pneumonia types at varying stages of infection and disease. However, the same models can promote important variations in outcome, potentially confounding scientific understanding in the field. Therefore, an expert panel was convened to deliberate best practices in animal models of bacterial pneumonia to identify validated methodologies and acknowledge limitations in the use of animal and non-animal models in this field of study. Herein, we summarize this American Thoracic Society workshop on animal models of bacterial pneumonia. This workshop further includes review of non-animal complementary or alternative models for studying bacterial pneumonia. Emphasis was placed on discussion of bacterial pathogens that frequently cause community- and hospital-acquired pneumonia, highlighting key aspects in modeling infection. Animal models discussed included small and large animals, based on their strengths. Finally and most importantly, the ethical considerations in the use of animal modeling for the study of bacterial lung infections was discussed. This workshop report is intended to provide insights to investigators in the field and may serve as a starting point for formal recommendations in the future.

Indexed as

Disease Models, AnimalPneumonia, BacterialAnimalsHumansUnited Statesanimalsbacterial infectionethical considerationsexperimental modelslungs

Identifiers

PMID40748059
PMCPMC12334885

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.