Evidence map›Paper›PMID 40747420›Full record

ArticlebioRxiv : the preprint server for biology2025

Isolation of genetically diverse influenza antibodies highlights the role of IG germline gene variation and informs the design of population-comprehensive vaccine strategies.

Alexandra A Fischer, Martin Corcoran, Philip J M Brouwer, Mark Chernyshev, Rebecca A Gillespie, Andrea Nicoletto, Johannes R Loeffler, James A Ferguson, Alesandra J Rodriguez, Sanjana Narang and 6 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Alexandra A FischerDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.ORCID 0000-0002-4662-3903
Martin CorcoranDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.ORCID 0000-0002-2774-0936
Philip J M BrouwerDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, San Diego, CA, USA.ORCID 0000-0002-2902-7739
Mark ChernyshevDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.ORCID 0000-0003-1622-9240
Rebecca A GillespieVaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0001-5741-3699
Andrea NicolettoDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.ORCID 0000-0002-9035-5176
Johannes R LoefflerDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, San Diego, CA, USA.ORCID 0000-0002-5724-655X
James A FergusonDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, San Diego, CA, USA.ORCID 0000-0003-2891-0850
Alesandra J RodriguezDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, San Diego, CA, USA.ORCID 0009-0009-6510-7558
Sanjana NarangDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.ORCID 0009-0000-8819-7319
Marit J van GilsAmsterdam UMC, University of Amsterdam, Department of Medical Microbiology and Infection Prevention, Amsterdam, Netherlands.ORCID 0000-0003-3422-8161
Xaquin Castro DopicoDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.ORCID 0000-0002-9005-6774
Masaru KanekiyoVaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0001-5767-1532
Andrew B WardDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, San Diego, CA, USA.ORCID 0000-0001-7153-3769
Julianna HanDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, San Diego, CA, USA.ORCID 0000-0002-3402-2609
Gunilla B Karlsson HedestamDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden.ORCID 0000-0001-7255-9047

Funding

COLLABORATIVE INFLUENZA VACCINE INNOVATION CENTER: UNIVERSAL INFLUENZA VACCINE RESEARCH75N93019C00051 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KRAMMER, FLORIAN · 2019 to 2025
$105.4M
NIAID NIH HHS 75N93019C00051
6 · The paper itself

Abstract

The regular emergence of influenza strains with pandemic potential creates a strong incentive to develop vaccines that stimulate protective responses across all human populations. A critical consideration is how variation in the human immunoglobulin (IG) loci influences B cell recognition of viral epitopes and elicitation of neutralizing antibodies. Here, we applied personalized IG germline genotyping and high-throughput sequencing of paired antibody chains from influenza A virus hemagglutinin (HA)-binding B cells to demonstrate that the response to HA is highly individual. We show that a germline-encoded polymorphism in IGHV2-70 alters the functionality of the LPAF-a class of neutralizing antibodies, and we describe HA stem-targeting broadly neutralizing antibodies (bNAbs) that use germline IGHV genes other than the population-restricted IGHV genes used by many previously known stem bNAbs. Our results demonstrate that the approach used here can be used to discover and avert population vulnerabilities arising from IG gene variation when designing HA-based influenza vaccines aimed for the global human population.

Indexed as

B cell receptorcentral stemcryoEM structuresepitopegermline targetingH1N1H5N1hemagglutininIG germline repertoireinfluenza Amonoclonal antibodiesneutralizing activitypersonalized genotypingpopulation diversitypublic clonotypesvaccine design

Identifiers

PMID40747420
PMCPMC12312180

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.