Evidence map›Paper›PMID 40746306›Full record

ArticleOrganic & biomolecular chemistry2025

DNA base pairs: the effect of the aromatic ring on the strength of the Watson-Crick hydrogen bonding.

Celine Nieuwland, Michiel J van Well, Laia Guillaumes, Anna de Vey Mestdagh, Lianne Dekker, Cynthia Nieuweboer, Sílvia Simon, Célia Fonseca Guerra

Abstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Celine NieuwlandDepartment of Chemistry and Pharmaceutical Sciences, Amsterdam Institute for Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands. c.nieuwland@vu.nl.ORCID 0000-0002-5855-4386
Michiel J van WellDepartment of Chemistry and Pharmaceutical Sciences, Amsterdam Institute for Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands. c.nieuwland@vu.nl.ORCID 0000-0003-1778-5636
Laia GuillaumesInstitut de Química Computacional i Catàlisi, Departament de Química, Universitat de Girona, 17071 Girona, Spain.
Anna de Vey MestdaghDepartment of Chemistry and Pharmaceutical Sciences, Amsterdam Institute for Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands. c.nieuwland@vu.nl.
Lianne DekkerDepartment of Chemistry and Pharmaceutical Sciences, Amsterdam Institute for Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands. c.nieuwland@vu.nl.
Cynthia NieuweboerDepartment of Chemistry and Pharmaceutical Sciences, Amsterdam Institute for Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands. c.nieuwland@vu.nl.
Sílvia SimonInstitut de Química Computacional i Catàlisi, Departament de Química, Universitat de Girona, 17071 Girona, Spain.ORCID 0000-0003-4935-1824
Célia Fonseca GuerraDepartment of Chemistry and Pharmaceutical Sciences, Amsterdam Institute for Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands. c.nieuwland@vu.nl.ORCID 0000-0002-2973-5321

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aromatic ring in DNA bases affects the Watson-Crick binding strength. Our quantum-chemical analyses, which compare the hydrogen bonding between the DNA bases and unsaturated analogs lacking the aromatic ring, reveal that this arises not from π-resonance assistance but from the electron-withdrawing (purines) or electron-donating (pyrimidines) effect of the heteroatom-containing ring on the frontier atoms. This electron redistribution modulates the electrostatics, steric Pauli repulsion, and σ-orbital interactions upon hydrogen bonding.

Indexed as

Base PairingDNAHydrogen BondingMolecular StructureQuantum TheoryDNA

Identifiers

PMID40746306
PMCPMC12314737

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.