Evidence map›Paper›PMID 40746181›Full record

ArticleG3 (Bethesda, Md.)2025

MLDAAPP: machine learning data acquisition for assessing population phenotypes.

Amir R Gabidulin, Seth M Rudman

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Microbiome evolution plays a secondary role in host rapid adaptation.bioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Amir R GabidulinSchool of Biological Sciences, Washington State University, 14204 NE Salmon Creek Avenue, Vancouver, WA 98686, United States.ORCID 0009-0002-2478-1780
Seth M RudmanSchool of Biological Sciences, Washington State University, 14204 NE Salmon Creek Avenue, Vancouver, WA 98686, United States.ORCID 0000-0001-5816-2801

Funding

Empirical tests of the contributions of genomic variation to the trajectories of adaptationR35GM147264 · NIGMS · WASHINGTON STATE UNIVERSITY · PI Seth Rudman · 2022 to 2026
$1.9M
National Institute of General Medicine of the National Institutes of Health #R35GM147264NIGMS NIH HHS R35 GM147264
6 · The paper itself

Abstract

Collecting phenotypic data from many individuals is critical to answering fundamental biological questions, particularly in genetics. Yet, whole organismal phenotypic data are still often collected manually; limiting the scale of data generation, precluding reproducible workflows, and creating potential bias. Computer vision can ameliorate these issues, but currently available packages only operate with specific inputs and have limited scalability. We present Machine Learning Data Acquisition for Assessing Population Phenotypes (MLDAAPP), a package of tools built on YOLOv8 for collecting phenotypic data from groups of individuals that is flexible for generating counts (e.g. Drosophila fecundity, census), movement (e.g. activity, aversive behavior), and many other potential phenotypes. MLDAAPP is both accurate and uniquely effective for obtaining phenotypic data in challenging conditions-particularly images and videos of varying quality derived from both lab and field environments. Employing MLDAAPP solves key issues of reproducibility and increases the scale and scope of data generation.

Indexed as

Machine LearningPhenotypeSoftwareAnimalsDrosophilaReproducibility of Resultscomputer visionDrosophilamachine learningphenomicsphenotypeYOLOv8

Identifiers

PMID40746181
PMCPMC12506647

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.