Evidence map›Paper›PMID 40745398›Full record

ArticleHeredity2026

Germline-restricted chromosome of songbirds has different centromere compared to regular chromosomes.

Jakub Rídl, Dmitrij Dedukh, Zuzana Halenková, Stephen A Schlebusch, Vladimír Beneš, Mireia Osuna Lopez, Tomasz S Osiejuk, Francisco J Ruiz-Ruano, Alexander Suh, Tomáš Albrecht and 2 more

Abstract read
In one paragraph

Article in Heredity, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jakub RídlDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic. jakub.ridl@img.cas.cz.ORCID http://orcid.org/0000-0003-2148-3606
Dmitrij DedukhLaboratory of Non-Mendelian Evolution, Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.
Zuzana HalenkováDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-8550-1693
Stephen A SchlebuschDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.
Vladimír BenešGenomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-0352-2547
Mireia Osuna LopezGenomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.
Tomasz S OsiejukDepartment of Behavioural Ecology, Institute of Environmental Biology, Faculty of Biology Adam Mickiewicz University, Poznan, Poland.
Francisco J Ruiz-RuanoCentre for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change, Bonn, Germany.ORCID http://orcid.org/0000-0002-5391-301X
Alexander SuhCentre for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change, Bonn, Germany.ORCID http://orcid.org/0000-0002-8979-9992
Tomáš AlbrechtDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic.
Jiří ReifInstitute for Environmental Studies, Faculty of Science, Charles University, Prague, Czech Republic.
Radka ReifováDepartment of Zoology, Faculty of Science, Charles University, Prague, Czech Republic. radka.reifova@natur.cuni.cz.ORCID http://orcid.org/0000-0001-5852-5174

Funding

Grantová Agentura České Republiky (Grant Agency of the Czech Republic) 23-07287SGrantová Agentura, Univerzita Karlova (Charles University Grant Agency) 314222Univerzita Karlova v Praze (Charles University) SVV 260684/2024
6 · The paper itself

Abstract

Centromeres are an important part of chromosomes which direct chromosome segregation during cell division. Their modifications can therefore explain the unusual mitotic and meiotic behaviour of certain chromosomes, such as the germline-restricted chromosome (GRC) of songbirds. This chromosome is eliminated from somatic cells during early embryogenesis and later also from male germ cells during spermatogenesis. Although the mechanism of elimination is not yet known, it is possible that it involves a modification of the centromeric sequence on the GRC, resulting in problems with the attachment of this chromosome to the mitotic or meiotic spindle and its lagging during anaphase, which eventually leads to its elimination from the nucleus. However, the repetitive nature and rapid evolution of centromeres make their identification and comparative analysis across species and chromosomes challenging. Here, we used a combination of cytogenetic and genomic approaches to identify the centromeric sequences of two closely related songbird species, the common nightingale (Luscinia megarhynchos) and the thrush nightingale (L. luscinia). We found a 436-bp satellite repeat present in the centromeric regions of all regular chromosomes (i.e., autosomes and sex chromosomes), making it a strong candidate for the centromeric repeat. This centromeric repeat was highly similar between the two nightingale species. Interestingly, hybridization of the probe to this satellite repeat on meiotic spreads suggested that this repeat is missing on the GRC. Our results indicate that the change of the centromeric sequence may underlie the unusual inheritance and programmed DNA elimination of the GRC in songbirds.

Indexed as

CentromereChromosomesGerm CellsSongbirdsAnimalsDNA, SatelliteMaleMeiosisDNA, Satellite

Identifiers

PMID40745398
PMCPMC13545247

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.