Evidence map›Paper›PMID 40745259›Full record

ArticleScientific reports2025

Deciphering anti-colorectal cancer potential of Avicennia alba bioactives via network pharmacology and in vitro validation.

Lalu Muhammad Irham, Wirawan Adikusuma, Didi Nurhadi Illian, Maulida Mazaya, Alfian Mubaraq, Muhammad Ma'ruf, Novi Kurnia Rizki, Maya Sari Mutia, Hayssam M Ali, Mohammad Basyuni

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Lalu Muhammad IrhamFaculty of Pharmacy, Universitas Ahmad Dahlan, Yogyakarta, 55164, Indonesia.
Wirawan AdikusumaResearch Center for Computing, Research Organization for Electronics and Informatics, National Research and Innovation Agency (BRIN), Cibinong Science Center, Cibinong, 16911, Indonesia.
Didi Nurhadi IllianDepartment of Pharmacy, Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh, 23111, Indonesia.
Maulida MazayaResearch Center for Computing, Research Organization for Electronics and Informatics, National Research and Innovation Agency (BRIN), Cibinong Science Center, Cibinong, 16911, Indonesia.
Alfian MubaraqCenter of Excellence for Mangrove, Universitas Sumatera Utara, Medan, 20155, Indonesia.
Muhammad Ma'rufDepartment of Pharmacy, STIKES ISFI Banjarmasin, Banjarmasin, 70123, Indonesia.
Novi Kurnia RizkiDepartment of Pharmacy, Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh, 23111, Indonesia.
Maya Sari MutiaDepartment of Histology, Faculty of Medicine, Dentistry, and Health Science, Universitas Prima, Medan, Indonesia.
Hayssam M AliDepartment of Botany and Microbiology, College of Science, King Saud University, 11451, Riyadh, Saudi Arabia.
Mohammad BasyuniCenter of Excellence for Mangrove, Universitas Sumatera Utara, Medan, 20155, Indonesia. m.basyuni@usu.ac.id.

Funding

King Saud University RSP2025R123Lembaga Pengelola Dana Pendidikan 91/UN5.2.3.1/PPM/KPEP/2023
6 · The paper itself

Abstract

Colorectal cancer (CRC) remains a significant global health challenge, with the current therapies often being inadequate. This study investigates the potential of Avicennia alba (A. alba), a mangrove plant, as a source of new anticancer drug candidates. We employed a network pharmacology, bioinformatics approach, and in vitro experimental to explore the molecular mechanisms of action and validating activity of A. alba in CRC treatment. Cytotoxicity effect was also evaluated using MTT assay. Four constituents of A. alba-Avicenol B, Avicenol C, Avicequinone B, and Avicequinone C-were verified, leading to the identification of 10 hub genes (i.e., EGFR, PIK3CA, JAK2, MTOR, JUN, ERBB2, IGF2, SRC, MDM2, and PARP1) associated with CRC. Molecular docking and molecular dynamics simulations indicated that Avicequinone C exhibited the best docking scores and stable interactions with the top three hub genes (EGFR, PIK3CA, and JAK2). The interactions were characterized by π-sigma, alkyl, and conventional hydrogen bonds. A. alba exhibited cytotoxic activity against WiDr cell lines with an IC

Indexed as

Antineoplastic Agents, PhytogenicAvicenniaColorectal NeoplasmsNetwork PharmacologyPlant ExtractsCell Line, TumorCell ProliferationHumansMolecular Docking SimulationMolecular Dynamics SimulationAntineoplastic Agents, PhytogenicPlant ExtractsAvicennia albaColorectal cancerDockingGenomicMolecular dynamics simulationTranscriptomic

Identifiers

PMID40745259
PMCPMC12313873

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.