Evidence map›Paper›PMID 40742543›Full record

ArticlePlanta2025

Identifying new players of gynoecium development using tissue-specific transcriptome data of Arabidopsis.

Eliana Arias-Pérez, Valentín Luna-García, Judith J Bernal-Gallardo, Stefan de Folter

Abstract read
In one paragraph

Article in Planta, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Eliana Arias-PérezCentro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (Cinvestav), Unidad de Genómica Avanzada (UGA-Langebio), 36824, Irapuato, Mexico.
Valentín Luna-GarcíaCentro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (Cinvestav), Unidad de Genómica Avanzada (UGA-Langebio), 36824, Irapuato, Mexico.
Judith J Bernal-GallardoCentro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (Cinvestav), Unidad de Genómica Avanzada (UGA-Langebio), 36824, Irapuato, Mexico.
Stefan de FolterCentro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (Cinvestav), Unidad de Genómica Avanzada (UGA-Langebio), 36824, Irapuato, Mexico. stefan.defolter@cinvestav.mx.ORCID http://orcid.org/0000-0003-4363-7274

Funding

Secretaría de Ciencia, Humanidades, Tecnología e Innovación (MX) 775897Secretaría de Ciencia, Humanidades, Tecnología e Innovación (MX) CB-2012-177739Secretaría de Ciencia, Humanidades, Tecnología e Innovación (MX) FC-2015-2/1061Secretaria de Estado de Ciência, Tecnologia e Ensino Superior de Minas Gerais CB-2017-2018-A1-S-10126
6 · The paper itself

Abstract

MAIN

conclusionWe identified new players of male and female reproductive development using tissue-specific gynoecium transcriptome data of Arabidopsis. Reproductive success in angiosperms depends on the correct development of the male and female organs. Pollen grains will land and germinate on the stigma, followed by the growth of pollen tubes that pass through the transmitting tract system of the gynoecium to reach the ovules. After the fertilization process occurred, seed and fruit development initiates. Genetic networks direct these biological processes needed for flower and fruit development to occur. Although many genes have been identified, still genes are to be discovered also to be involved in these networks. The availability of transcriptomic data from specific tissues of the gynoecium in Arabidopsis allowed us to select genes for functional analysis. As a result, from the analysis of the mutant plants we found that the genes CLE19, TBL36, ATHB5, CYCP4;1, AT3G06035, and AT1G15760 affect fertility in Arabidopsis. The mutant plants showed gynoecia with aborted ovules and short fruits with a lower number of seeds compared to wild type. Furthermore, pollen development and pollen tube growth were affected in most of the mutants. These results help us know and understand the genes that contribute to flower development in Arabidopsis.

Indexed as

ArabidopsisFlowersTranscriptomeArabidopsis ProteinsFruitGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantMutationOvulePollenPollen TubeSeedsArabidopsis ProteinsFertilizationFruitGynoeciumPollen tubeSeedsSeptumTranscriptomeTransmitting tract

Identifiers

PMID40742543
PMCPMC12313761

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.