Evidence map›Paper›PMID 40742099›Full record

ArticleCancer research communications2025

Gut Microbiome Profiling in Eμ-TCL1 Mice Reveals Intestinal Changes and a Dysbiotic Signature Specific to Chronic Lymphocytic Leukemia.

Sydney A Skupa, Kathryn M Cooper, Audrey L Smith, Erin M Drengler, Alexandria P Eiken, Elizabeth Schmitz, Grace M Waldron, Grinu Mathew, Mark Primeaux, Punita Dhawan and 3 more

Abstract read
In one paragraph

Article in Cancer research communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sydney A SkupaEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0002-8933-6015
Kathryn M CooperSchool of Interdisciplinary Informatics, University of Nebraska at Omaha, Omaha, Nebraska.ORCID 0000-0002-6341-9648
Audrey L SmithEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0001-5096-5351
Erin M DrenglerEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0009-0004-2740-7131
Alexandria P EikenEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0003-0161-7814
Elizabeth SchmitzEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0002-9619-5193
Grace M WaldronEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0002-9711-8464
Grinu MathewEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0001-6115-6373
Mark PrimeauxDepartment of Biochemistry and Molecular Biology, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0001-7589-3745
Punita DhawanFred and Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0003-3434-8155
Geoffrey A TalmonDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0002-4841-286X
Christopher R D'Angelo *Fred and Pamela Buffett Cancer Center, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0001-8456-0889
Dalia El-Gamal *Eppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska.ORCID 0000-0002-1083-8283

Funding

UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI PAUL L SORGEN · 2012 to 2026
$59.2M
UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Joann B. Sweasy · 1985 to 2026
$55.0M
Tracking and Evaluation CoreU54GM115458 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI GUDA, CHITTIBABU · 2016 to 2025
$42.8M
Target Validation CoreP20GM121316 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Robert E. Lewis · 2018 to 2026
$23.5M
CHEMICAL CARCINOGENESIS &CANCER BIOLOGYT32CA009476 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Jennifer D. Black · 1988 to 2026
$6.2M
Leveraging PMN immune response to overcome ADT resistance in bone metastatic prostate cancerR01CA274605 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI MATHEW, GRINU · 2022 to 2025
$1.7M
Quantitative Lung Function Imaging to Reduce Toxicity for patients treated with Radiation and ImmunotherapyUH3CA247605 · NCI · THOMAS JEFFERSON UNIVERSITY · PI CASTILLO, EDWARD, CASTILLO, RICHARD · 2023 to 2025
$1.1M
Quantitative Lung Function Imaging to Reduce Toxicity for patients treated with Radiation and ImmunotherapyUG3CA247605 · NCI · THOMAS JEFFERSON UNIVERSITY · PI CASTILLO, EDWARD, CASTILLO, RICHARD · 2021 to 2022
$664k
Great Plains IDeA-CTR N/ALB506 Nebraska Department of Health & Human Services Cancer and Smoking Disease Research Program #2024 to 2014National Cancer Institute (NCI) 5R01CA247605-03NCI NIH HHS P30 CA036727NCI NIH HHS R01 CA274605NCI NIH HHS T32 CA009476NCI NIH HHS UG3 CA247605NCI NIH HHS UH3 CA247605NIGMS COBRE 2P20GM121316-06NIGMS NIH HHS P20 GM103427NIGMS NIH HHS P20 GM121316NIGMS NIH HHS U54 GM115458University of Nebraska Collaborative NR-26743UNMC Graduate Studies Fellowships N/A
6 · The paper itself

Abstract

The gut microbiome's role in the pathogenesis of hematologic malignancies is actively being explored; yet studies on chronic lymphocytic leukemia (CLL) are limited. Using the Eμ-TCL1 murine model of CLL, we identify a unique and dysbiotic disease-associated gut microbiome that develops in mice over time. Leukemic mice show an increase in abundance of pathogenic bacteria, specifically members of the Proteobacteria phylum. We found that this dysbiotic microenvironment is associated with CLL involvement within the intestinal tract and high levels of markers indicative of altered tight junction permeability (e.g., claudin-2, soluble CD14, and zonulin). Moreover, utilizing the syngeneic model of CLL in tandem with an antibiotic-mediated microflora ablation approach, we found that leukemic mice receiving microflora-ablating antibiotics show marked changes to the gut microbiome and a delayed disease onset compared with mice receiving antibiotic-free water. Immunophenotyping of murine spleens showed that this delay in disease was accompanied by more tumor-reactive CD8+ T cells that coexpressed fewer inhibitory receptors (e.g., PD-1, LAG-3, and TIM-3). These findings confirm that a dysbiotic gut microbiome develops during CLL disease and demonstrate unique intestinal involvement and potential immune dysregulation occurring during CLL progression that may be influencing the overall microbial signature. SIGNIFICANCE: There is a growing appreciation for the gut microbiome's role in hematologic malignancies. Despite this, its role in CLL remains obscure. This study demonstrates a dysbiotic microbiome within CLL that may contribute to further intestinal and immune dysregulation present during CLL progression.

Indexed as

DysbiosisGastrointestinal MicrobiomeIntestinesLeukemia, Lymphocytic, Chronic, B-CellAnimalsAnti-Bacterial AgentsDisease Models, AnimalMiceMice, Inbred C57BLMice, TransgenicProto-Oncogene ProteinsAnti-Bacterial AgentsProto-Oncogene ProteinsTcl1 protein, mouse

Identifiers

PMID40742099
PMCPMC12354945

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.