Evidence map›Paper›PMID 40741125›Full record

ArticleFrontiers in plant science2025

SaGP: identifying plant saline-alkali tolerance genes based on machine learning techniques.

Baixue Qiao, Wentao Gao, Xudong Zhang, Min Du, Shuda Wang, Xuanrui Liu, Shaozi Pang, Chunxue Yang, Jiang Wang, Yuming Zhao and 1 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Harnessing artificial intelligence in plant breeding: innovations in digital phenotyping and breeding methodologies.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Baixue Qiao *School of Ecology, Northeast Forestry University, Harbin, China.
Wentao Gao *College of Computer and Control Engineering, Northeast Forestry University, Harbin, China.
Xudong ZhangKey Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, Northeast Forestry University, Harbin, China.
Min DuKey Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, Northeast Forestry University, Harbin, China.
Shuda WangKey Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, Northeast Forestry University, Harbin, China.
Xuanrui LiuKey Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, Northeast Forestry University, Harbin, China.
Shaozi PangKey Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, Northeast Forestry University, Harbin, China.
Chunxue YangCollege of Landscape Architecture, Northeast Forestry University, Harbin, China.
Jiang WangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, China.
Yuming ZhaoCollege of Computer and Control Engineering, Northeast Forestry University, Harbin, China.
Linan XieSchool of Ecology, Northeast Forestry University, Harbin, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mining novel genes underlying agronomical traits is a crucial subject in plant biology, essential for enhancing crop quality, ensuring food security, and preserving biodiversity. Wet experiments are the main methods to uncover genes with target functions but are expensive and time-consuming. Machine learning, in contrast, can accelerate the gene discovery process by learning from accumulated data, making it more efficient and cost-effective. However, despite their potential, existing machine-learning tools to mine stress-resistant genes in plants are scarce. In this study, we developed the first known machine learning model, SaGP (Saline-alkali Genes Prediction), to identify plant saline-alkali tolerance genes based on sequencing data. It outperformed traditional computational tools,

Indexed as

feature selectiongene miningmachine learningSAGPsaline-alkali tolerance genes

Identifiers

PMID40741125
PMCPMC12307364

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.