Evidence map›Paper›PMID 40736900›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Current Approaches in Genome Assembly of Human Fungal Pathogens.

Johanna Rhodes

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Pharmacological advances inJournal of enzyme inhibition and medicinal chemistry · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Johanna RhodesDepartment of Medical Microbiology, Radboudumc, Nijmegen, The Netherlands. j.rhodes@bham.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human fungal pathogens account for ~1.5 million deaths annually across the globe, more than malaria and TB combined, in addition to a significant morbidity cost. Genome sequencing has proved to have a crucial role in the analysis of human fungal pathogens, allowing us to gain insights into their virulence factors, drug resistance mechanisms, and population dynamics. The process of reconstructing (near) complete genomes from fragmented DNA sequence, referred to as genome assembly, plays a pivotal role in modern fungal genomics. This book chapter aims to provide an exploration of genome assembly methods and techniques applied to human fungal pathogens, enabling a deeper understanding of their nature and life histories, yet highlighting the unique challenges within this area.

Indexed as

FungiGenome, FungalGenomicsHumansMycosesSequence Analysis, DNAAlignmentDe novoReference-based

Identifiers

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.