Evidence map›Paper›PMID 40736785›Full record

ArticleVirus genes2025

Detection of potato virus S in Colorado potato beetle RNA-seq data.

Maria Antonets, Sergei Bodnev, Ulyana Rotskaya, Vadim Kryukov, Denis Antonets

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Maria AntonetsInstitute of Systematics and Ecology of Animals SB RAS, Frunze St. 11, 630091, Novosibirsk, Russia. starchevskayamaria@mail.ru.
Sergei BodnevState Research Center of Virology and Biotechnology "Vector", Rospotrebnadzor, 630559, Koltsovo, Russia.
Ulyana RotskayaInstitute of Systematics and Ecology of Animals SB RAS, Frunze St. 11, 630091, Novosibirsk, Russia.
Vadim KryukovInstitute of Systematics and Ecology of Animals SB RAS, Frunze St. 11, 630091, Novosibirsk, Russia.
Denis AntonetsMSU Institute for Artificial Intelligence, Lomonosov Ave. 27, 119192, Moscow, Russia.

Funding

Russian Scientific Foundation 22-14-00309
6 · The paper itself

Abstract

Potato virus S (PVS) is a widely distributed potato pathogen that typically causes mild or asymptomatic infections. Still, certain genotypes can cause up to 20% yield losses, especially when co-infected with other viruses. Aphids are the only currently recognized insect vectors of PVS; however, the mechanical transmission through plant contact is also known. The Colorado potato beetle (CPB) is a major potato pest. In this study, we report the partial PVS genome assembled from the RNA-seq data obtained from CPB field samples and the phylogenetic analysis of its triple gene block (TGB) nucleotide sequence with corresponding sequences, extracted from published PVS genomes and PVS genomes assembled from publicly available CPB RNA-Seq data. The CPB-derived PVS sequences clustered within the globally prevalent PVS

Indexed as

CarlavirusColeopteraPlant DiseasesSolanum tuberosumAnimalsGenome, ViralPhylogenyRNA-SeqColorado potato beetleHigh-throughput sequencingNGSPlant protectionPotato virus SSISPA

Identifiers

PMID40736785

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.