Evidence map›Paper›PMID 40730946›Full record

ArticleBMC plant biology2025

Comprehensive identification, stress responses and protein-protein interactions of the ferredoxin gene family in the fast-growing tree species Paulownia fortunei.

Xin Mao, Haibo Yang, Mengmeng Ji, Pingluo Xu, Guoqiang Fan

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xin Mao *Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P.R. China.
Haibo Yang *Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P.R. China.
Mengmeng Ji *Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P.R. China.
Pingluo XuInstitute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P.R. China.
Guoqiang FanInstitute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P.R. China. zlxx64@henau.edu.cn.

Funding

Germplasm Innovation, Development and Application of Characteristic Economic Plants 224400510018Henan Provincial Science and Technology Research Project 252102110337National Key Research and Development Program of China Grant No. 2016YFD0600106Project of Central Plains Science and Technology Innovation Leading Talents of Henan Province 224200510010Special project for the construction of central plains scholars and scientists' studios 30601986
6 · The paper itself

Abstract

Paulownia fortunei is a significant fast-growing economic tree species with wide industrial value, and studies have revealed that its rapid growth mechanism is associated with its C3-CAM photosynthetic characteristics. Ferredoxin, a key protein in the plant photosynthetic electron transport chain, plays a crucial role in both C3 and CAM pathways. In addition to participating in plant photosynthesis and carbon assimilation, ferredoxin also plays important roles in plant nitrogen assimilation, sulfur metabolism, and responses to biotic and abiotic stresses. In this study, bioinformatics analysis was utilized to identify eight members of the ferredoxin gene family in Paulownia fortunei, categorized into four subfamilies distributed across eight different chromosomes. All members contain a 2Fe-2 S domain and light-responsive elements, displaying high conservation among subfamily members. Transcriptome analysis and real-time quantitative PCR (qRT-PCR) assays indicated that photosynthetic ferredoxins PfFd1 and PfFd2 play important roles in the response of Paulownia fortunei to droughts, salt and pathogen stresses. Yeast two-hybrid(Y2H)results showed that PfFd1 and PfFd2 can form heterodimers. Interaction predictions, Y2H, and bimolecular fluorescence complementation (BiFC) experiments verified direct interactions between the major photosynthetic ferredoxin PfFd2 and ferredoxin-NADP + reductase (FNR) as well as sulfite reductase (SIR) in Paulownia fortunei, suggesting that PfFd2 may play a significant role in photosynthetic electron transport and sulfur metabolism in Paulownia fortunei, implying its potential association with the fast-growing characteristics of Paulownia fortunei and its influence on normal growth and metabolism. Additionally, the interaction between the Paulownia witches' broom phytoplasma effector pawb3 and PfFd2 was verified through Y2H and GST pull-down experiments, suggesting that PfFd2 may be related to disease resistance in Paulownia fortunei. This study systematically analyzed the family characteristics of ferredoxins in Paulownia fortunei and preliminary explored their biological functions, providing a theoretical basis for future in-depth exploration of molecular mechanisms related to plant fast growth and the cultivation of high-resistance, fast-growing germplasm resources.

Indexed as

FerredoxinsPlant ProteinsGene Expression Regulation, PlantMultigene FamilyPhotosynthesisPhylogenyStress, PhysiologicalTreesFerredoxinsPlant ProteinsFast-growingFerredoxinPaulownia fortuneiStress response

Identifiers

PMID40730946
PMCPMC12306049

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.