Evidence map›Paper›PMID 40730795›Full record

ArticleScientific data2025

AI generated annotations for Breast, Brain, Liver, Lungs, and Prostate cancer collections in the National Cancer Institute Imaging Data Commons.

Gowtham Krishnan Murugesan, Diana McCrumb, Rahul Soni, Jithendra Kumar, Leonard Nuernberg, Linmin Pei, Ulrike Wagner, Sutton Granger, Andrey Y Fedorov, Stephen Moore and 1 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Gowtham Krishnan MurugesanBAMF Health, Grand Rapids, MI, USA. gowtham.murugesan@bamfhealth.com.ORCID 0000-0002-2160-6648
Diana McCrumbBAMF Health, Grand Rapids, MI, USA.
Rahul SoniBAMF Health, Grand Rapids, MI, USA.
Jithendra KumarBAMF Health, Grand Rapids, MI, USA.
Leonard NuernbergBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.ORCID 0000-0001-6544-4268
Linmin PeiFrederick National Laboratory for Cancer Research, Frederick, MD, USA.
Ulrike WagnerFrederick National Laboratory for Cancer Research, Frederick, MD, USA.
Sutton GrangerNational Institute of Health, Bethesda, MD, USA.
Andrey Y FedorovBrigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-4806-9413
Stephen MooreBAMF Health, Grand Rapids, MI, USA.
Jeff Van OssBAMF Health, Grand Rapids, MI, USA.ORCID 0000-0002-0632-3519

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
NCI NIH HHS 75N91019D00024
6 · The paper itself

Abstract

The Artificial Intelligence in Medical Imaging (AIMI) initiative aims to enhance the National Cancer Institute's (NCI) Image Data Commons (IDC) by releasing fully reproducible nnU-Net models, along with AI-assisted segmentation for cancer radiology images. In this extension of our earlier work, we created high-quality, AI-annotated imaging datasets for 11 IDC collections, spanning computed tomography (CT) and magnetic resonance imaging (MRI) of the lungs, breast, brain, kidneys, prostate, and liver. Each nnU-Net model was trained on open-source datasets, and a portion of the AI-generated annotations was reviewed and corrected by board-certified radiologists. Both the AI and radiologist annotations were encoded in compliance with the Digital Imaging and Communications in Medicine (DICOM) standard, ensuring seamless integration into the IDC collections. By making these models, images, and annotations publicly accessible, we aim to facilitate further research and development in cancer imaging.

Indexed as

Artificial IntelligenceNeoplasmsBreast NeoplasmsFemaleHumansMagnetic Resonance ImagingMaleNational Cancer Institute (U.S.)Prostatic NeoplasmsTomography, X-Ray ComputedUnited States

Identifiers

PMID40730795
PMCPMC12307902

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.