Evidence map›Paper›PMID 40729627›Full record

ArticleThe journal of physical chemistry letters2025

Symmetric Ligand Binding Pathways and Dual-State Bottleneck in [NiFe] Hydrogenases from Unbiased Molecular Dynamics.

Farzin Sohraby, Ariane Nunes-Alves

Abstract read
In one paragraph

Article in The journal of physical chemistry letters, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Farzin SohrabyInstitute of Chemistry, Technische Universität Berlin, Straße des 17. Juni 135, 10623 Berlin, Germany.ORCID 0000-0003-1924-573X
Ariane Nunes-AlvesInstitute of Chemistry, Technische Universität Berlin, Straße des 17. Juni 135, 10623 Berlin, Germany.ORCID 0000-0002-5488-4732

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

[NiFe] hydrogenases make up a family of enzymes that can be used to produce biofuel, thus making them important for industrial applications. In this work, we utilized unbiased molecular dynamics simulations to capture binding and unbinding events of the substrate, H

Indexed as

HydrogenaseMolecular Dynamics SimulationBinding SitesCatalytic DomainHydrogenLigandsProtein BindingHydrogenHydrogenaseLigandsnickel-iron hydrogenase

Identifiers

PMID40729627
PMCPMC12337149

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.