Evidence map›Paper›PMID 40728976›Full record

ArticleCurrent issues in molecular biology2025

Cross-Activity Analysis of CRISPR/Cas9 Editing in Gene Families of

Ofri Kutchinsky, Dongqi Li, Guy Assa, Asaph Aharoni, Zohar Yakhini

Abstract read
In one paragraph

Article in Current issues in molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ofri KutchinskyArazi School of Computer Science, Reichman University, Herzliya 4610101, Israel.
Dongqi LiWeizmann Institute of Science, Rehovot 7610001, Israel.
Guy AssaThe Henry & Marilyn Taub Faculty of Computer Science, Technion-Israel Institute of Technology, Haifa 3200003, Israel.ORCID 0009-0006-3344-6561
Asaph AharoniWeizmann Institute of Science, Rehovot 7610001, Israel.
Zohar YakhiniArazi School of Computer Science, Reichman University, Herzliya 4610101, Israel.

Funding

Israel Innovation Authority through the CRISPR-IL consortium unknown
6 · The paper itself

Abstract

CRISPR/Cas9 genome editing holds promise for precise genetic modifications, yet off-target effects remain a concern-particularly in gene families with high sequence similarity. In this study, we present a computational framework for analyzing editing specificity and cross-reactivity in gene families using long-read sequencing data. The pipeline integrates multiplex PCR, NGS, and CRISPECTOR-based analysis to detect and quantify on- and off-target events with high sensitivity. As a use case, we applied this framework to

Indexed as

CRISPECTORediting specificitygenome editingoff-target effects

Identifiers

PMID40728976
PMCPMC12293931

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.