Evidence map›Paper›PMID 40725459›Full record

ArticleGenes2025

Transcriptome Profiling Reveals Differences Between Rainbow Trout Eggs with High and Low Potential for Gynogenesis.

Konrad Ocalewicz, Artur Gurgul, Stefan Dobosz, Igor Jasielczuk, Tomasz Szmatoła, Ewelina Semik-Gurgul, Mirosław Kucharski, Rafał Rożyński

Abstract read
In one paragraph

Article in Genes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Konrad OcalewiczDepartment of Marine Biology and Biotechnology, Faculty of Oceanography and Geography, University of Gdańsk, M. Piłsudskiego 46 Av, 81-378 Gdynia, Poland.ORCID 0000-0001-7122-7542
Artur GurgulCenter for Experimental and Innovative Medicine, University of Agriculture in Kraków, Redzina 1C, 30-248 Krakow, Poland.ORCID 0000-0001-5979-144X
Stefan DoboszDepartment of Salmonid Research, Inland Fisheries Institute in Olsztyn, Rutki, 83-330 Żukowo, Poland.
Igor JasielczukCenter for Experimental and Innovative Medicine, University of Agriculture in Kraków, Redzina 1C, 30-248 Krakow, Poland.ORCID 0000-0001-8583-3850
Tomasz SzmatołaCenter for Experimental and Innovative Medicine, University of Agriculture in Kraków, Redzina 1C, 30-248 Krakow, Poland.
Ewelina Semik-GurgulDepartment of Animal Molecular Biology, National Research Institute of Animal Production, Krakowska 1, 32-083 Balice, Poland.ORCID 0000-0003-4667-5495
Mirosław KucharskiDepartment of Animal Physiology and Endocrinology, University of Agriculture in Kraków, Mickiewicza 24/28, 30-059 Krakow, Poland.ORCID 0000-0002-0301-3224
Rafał RożyńskiDepartment of Marine Biology and Biotechnology, Faculty of Oceanography and Geography, University of Gdańsk, M. Piłsudskiego 46 Av, 81-378 Gdynia, Poland.

Funding

National Science Center 2020/39/B/NZ9/00865
6 · The paper itself

Abstract

BACKGROUND/

objectivesFish eggs activated with UV-irradiated spermatozoa and exposed to the High Hydrostatic Pressure (HHP) shock to inhibit first cell cleavage develop as gynogenetic Doubled Haploids (DHs) that are fully homozygous individuals. Due to the expression of the recessive genes and side effects of the gamete treatment, survival of fish DHs is rather low, and most of the mitotic gynogenotes die before hatching. Nevertheless, as maternal gene products provided during oogenesis control the initial steps of embryonic development in fish, a maternal effect on the survival of gynogenotes needs to be also considered to affect efficiency of gynogenesis. Thus, the objective of this research was to apply an RNA-seq approach to discriminate transcriptional differences between rainbow trout (

methodsGynogenetic development of rainbow trout was induced in eggs originated from eight females. Maternal RNA was isolated and sequenced using RNA-Seq approach. Survival rates of gynogenotes and transcriptome profiles of eggs from different females were compared.

resultsRNA-seq analysis revealed substantial transcriptional differences between eggs originated from different females, and a significant correlation between the ability of the eggs for gynogenesis and their transcriptomic profiles was observed. Genes whose expression was altered in eggs with the increased survival of DHs were mostly associated (GO BP) with the following biological processes: development, cell differentiation, cell migration and protein transport. Some of the genes are involved in the oocyte maturation (

conclusionsInter-individual variation of the transcription of maternal genes correlated with the competence of eggs for gynogenesis suggest that at least part of the mortality of the rainbow trout DHs appear before activation of zygotic genome and expression of the lethal recessive traits.

Indexed as

Oncorhynchus mykissOogenesisOvumTranscriptomeAnimalsFemaleGene Expression ProfilingGene Expression Regulation, DevelopmentalHaploidyMaledoubled haploidsegg qualitymaternal RNAreproductionRNA-seqsalmonids

Identifiers

PMID40725459
PMCPMC12294859

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.