Evidence map›Paper›PMID 40725231›Full record

ArticleInternational journal of molecular sciences2025

Single-Cell Transcriptomic Changes in Patient-Derived Glioma and U87 Glioblastoma Cell Cultures Infected with the Oncolytic Virus VV-GMCSF-Lact.

Dmitriy V Semenov, Natalia S Vasileva, Maxim E Menyailo, Sergey V Mishinov, Yulya I Savinovskaya, Alisa B Ageenko, Anna S Chesnokova, Maya A Dymova, Grigory A Stepanov, Galina V Kochneva and 2 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dmitriy V SemenovInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.
Natalia S VasilevaInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.ORCID 0000-0002-0392-794X
Maxim E MenyailoLaboratory of Cancer Progression Biology, Cancer Research Institute, Tomsk National Research Medical Center, Russian Academy of Sciences, Kooperativny Str. 5, Tomsk 634009, Russia.ORCID 0000-0003-4630-4934
Sergey V MishinovTsivyan Novosibirsk Research Institute of Traumatology and Orthopedics, Department of Neurosurgery, Frunze Street, 17, Novosibirsk 630091, Russia.ORCID 0000-0002-0903-7278
Yulya I SavinovskayaInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.
Alisa B AgeenkoInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.ORCID 0000-0002-6909-7301
Anna S ChesnokovaInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.
Maya A DymovaInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.ORCID 0000-0002-7281-9096
Grigory A StepanovInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.ORCID 0000-0003-3393-3192
Galina V KochnevaState Research Center of Virology and Biotechnology "Vector", Rospotrebnadzor, Koltsovo 630559, Russia.ORCID 0000-0002-2420-0483
Vladimir A RichterInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.
Elena V KuliginaInstitute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, Lavrentyev Avenue, 8, Novosibirsk 630090, Russia.ORCID 0000-0003-3145-1878

Funding

the Russian Science Foundation 24-14-00390the Russian state-funded project for ICBFM SB RAS 125012900932-4the State program 'Scientific and technological development of the "Sirius" Federal Territory' 27-03
6 · The paper itself

Abstract

Oncolytic virotherapy is a rapidly evolving approach to cancer treatment. Our group previously designed VV-GMCSF-Lact, a recombinant oncolytic vaccinia virus targeting solid tumors including gliomas. In this study, we used single-cell RNA sequencing to compare transcriptional responses in human glioma cells, non-malignant brain cells, and immortalized glioblastoma U87 MG cells following infection with this oncolytic virus. We found that proneural glioblastoma cells and microglia-like cells from patient-derived glioma cultures were the most susceptible to VV-GMCSF-Lact. Increased expressions of histones, translational regulators, and ribosomal proteins positively correlated with viral load at the transcript level. Furthermore, higher viral loads were accompanied by a large-scale downregulation of genes involved in mitochondrial translation, metabolism, and oxidative phosphorylation. Levels of early vaccinia virus transcripts are also positively correlated with infection intensity, suggesting that the fate of cells is determined at the early stage of infection.

Indexed as

Brain NeoplasmsGlioblastomaGliomaOncolytic VirusesTranscriptomeVaccinia virusCell Line, TumorGene Expression Regulation, NeoplasticHumansOncolytic VirotherapySingle-Cell AnalysisViral Loaddifferentially expressed genesglioblastomagliomaoncolytic viruspatient-derived cell culturessingle cell transcriptomevaccinia virusvirotherapyVV-GMCSF-Lact

Identifiers

PMID40725231
PMCPMC12295809

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.